Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a17r
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   1.8  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   1.8  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    24   4.1  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   4.1  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    24   4.1  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   9.4  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = -1

Query: 75  ELLHHNCFYFHHKISWSSIISPMKK 1
           +L HH  +  HH++S+ ++ +P ++
Sbjct: 498 DLPHHTHYQLHHQMSYHNMFTPSRE 522


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = -1

Query: 75  ELLHHNCFYFHHKISWSSIISPMKK 1
           +L HH  +  HH++S+ ++ +P ++
Sbjct: 474 DLPHHTHYQLHHQMSYHNMFTPSRE 498


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 166 IRHDWLKYKECVHKCIKKLQELILINLK 249
           IRHDW    E V   IK +  +  ++L+
Sbjct: 121 IRHDWATLTESVQNHIKSVNWVTRVDLR 148


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 166 IRHDWLKYKECVHKCIKKLQELILINLK 249
           IRHDW    E V   IK +  +  ++L+
Sbjct: 97  IRHDWATLTESVQNHIKSVNWVTRVDLR 124


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 166 IRHDWLKYKECVHKCIKKLQELILINLK 249
           IRHDW    E V   IK +  +  ++L+
Sbjct: 94  IRHDWATLTESVQNHIKSVNWVTRVDLR 121


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 409 VKYFIHFILFLFEYFL 362
           +K +IH++  +F YFL
Sbjct: 258 IKVYIHWLYMIFVYFL 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,347
Number of Sequences: 2352
Number of extensions: 9372
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)