Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a17f
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.5  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   1.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   5.9  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 146 LNKIKALHFHRATQVITIHEQTLDITFL 63
           LNKI ALH H  ++++ +  +T  I  L
Sbjct: 502 LNKICALH-HHLSKLVKLFNETFGIVLL 528


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 146 LNKIKALHFHRATQVITIHEQTLDITFL 63
           LNKI ALH H  ++++ +  +T  I  L
Sbjct: 227 LNKICALH-HHLSKLVKLFNETFGIVLL 253


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = +2

Query: 218 EELK-CLDKVWHKGCFKCQE 274
           EELK  L    H GC KC E
Sbjct: 61  EELKKALPDALHSGCSKCTE 80


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 3   SYFWHARTGM 32
           ++FWHA TG+
Sbjct: 240 THFWHAHTGL 249


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 3   SYFWHARTGM 32
           ++FWHA TG+
Sbjct: 240 THFWHAHTGL 249


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 377 PELKRIAENTKLQSNVKYHADFERSKGK 460
           P L R   + K + N+K+HA+  +   K
Sbjct: 367 PPLTREEIHEKARENLKHHANLRQKNQK 394


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,507
Number of Sequences: 336
Number of extensions: 2743
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)