Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a17f
(591 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 2e-33
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 48 6e-06
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 45 4e-05
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 44 9e-05
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 42 3e-04
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 42 4e-04
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 40 0.002
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 37 0.011
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 36 0.019
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 36 0.025
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 35 0.043
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 35 0.057
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 33 0.13
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 32 0.30
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 32 0.40
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 32 0.40
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 32 0.40
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 31 0.70
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.6
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 30 1.6
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 2.1
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 29 2.1
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 29 2.8
SB_52134| Best HMM Match : C1_1 (HMM E-Value=1.8) 29 3.8
SB_45976| Best HMM Match : MBT (HMM E-Value=0) 29 3.8
SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 5.0
SB_50683| Best HMM Match : Nop10p (HMM E-Value=2.6) 28 5.0
SB_31845| Best HMM Match : Arm (HMM E-Value=3.2e-13) 28 5.0
SB_8440| Best HMM Match : RVT_1 (HMM E-Value=4.3e-18) 28 6.6
SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 6.6
SB_19016| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19) 28 6.6
SB_57398| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 27 8.7
SB_19544| Best HMM Match : Ribosomal_S18 (HMM E-Value=4.9) 27 8.7
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 138 bits (335), Expect = 2e-33
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Frame = +2
Query: 242 VWHKGCFKCQECSMTLNMRTYXGYGKLPYCEAHVPKAKPTTMAETPELKRIAENTKLQSN 421
VWHKGCFKC+ C MTLNM+TY GY KLPYC+AH PK K T +A+T E +RI NT++QS
Sbjct: 212 VWHKGCFKCESCGMTLNMKTYKGYQKLPYCDAHYPKTKHTVVADTLENQRIKTNTQIQSQ 271
Query: 422 VKYHADFERSKGKFTQVADDPETLRIKANTKIISNVAY-HGDLEKKAQMERQRQINE 589
V+Y DFE+S+G++T ++DDPETLR + SNVAY +G ++ + E
Sbjct: 272 VQYQRDFEQSRGRYTVISDDPETLRAINVNRNSSNVAYQNGSRDQYTDKSNSETVRE 328
Score = 77.4 bits (182), Expect = 8e-15
Identities = 35/68 (51%), Positives = 44/68 (64%)
Frame = +2
Query: 338 HVPKAKPTTMAETPELKRIAENTKLQSNVKYHADFERSKGKFTQVADDPETLRIKANTKI 517
H P KPTT+A+TPE R+ ++ QSNV Y D+E SKG +T V DDPE +R K N I
Sbjct: 81 HYPTTKPTTVADTPENLRLRIQSQNQSNVTYKKDYEESKGHYTAVTDDPEVIRAKQNMNI 140
Query: 518 ISNVAYHG 541
+S V Y G
Sbjct: 141 VSQVKYTG 148
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 458 KFTQVADDPETLRIKANTKIISNVAYHGDLEK 553
K T VAD PE LR++ ++ SNV Y D E+
Sbjct: 86 KPTTVADTPENLRLRIQSQNQSNVTYKKDYEE 117
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 182 TCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCE 334
TCA C + + ++ L L+K WH CF C +C L++ Y G PYCE
Sbjct: 88 TCAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLLSLE-YMGMDGKPYCE 137
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 167 FKMNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCE 334
F + + C RC KTVY EE + K WHK C C+ C+ +L+ YC+
Sbjct: 4 FGVVEKCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCK 59
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 173 MNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLN 292
M C RCEK VY E+ K K WHK C C+ C+ L+
Sbjct: 1 MPDKCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLD 40
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 173 MNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCE 334
M + CA C+ + LK LD VWH C +C +C L R + GKL +C+
Sbjct: 1 MVQQCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCFSREGKL-FCK 53
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYG 316
C +C+KTVY E L +HK CF C C+ +L+ T G
Sbjct: 12 CPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLDSTTVADRG 55
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRT 301
C RCEK Y E++ WHK CF C +C L+ T
Sbjct: 218 CPRCEKRAYAAEQVLGAGFNWHKSCFNCYKCHKKLDSTT 256
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQE 274
C RC+K Y E + K WHK CF C E
Sbjct: 297 CGRCDKMCYHAEGISMAGKRWHKSCFACAE 326
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLN 292
C RC VY EE+ + +HK CF C++C L+
Sbjct: 44 CPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLD 79
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYC 331
CA C++ ++ + D+ WH+ F C EC L + Y G P+C
Sbjct: 374 CAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHC 422
Score = 34.7 bits (76), Expect = 0.057
Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCL-----DKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCEAHVPK 349
C RC K V E DK WH GCF C C+ L Y + YC H +
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAE 368
Query: 350 AKPTTMAETPEL 385
A EL
Sbjct: 369 QFKPRCAACDEL 380
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 155 GLKPFKMNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYC 331
G KPF C + ++ E ++K WH G F+CQ C ++ R + G P C
Sbjct: 270 GAKPFYSAGPCLKA-LLIFTGEYTVAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVC 327
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 170 KMNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYC 331
K +K CA C + + L + WHK CF C C +L + YC
Sbjct: 458 KFSKRCASCGEPLLEGGVLYN-GETWHKACFSCYFCHRSLASAAFSVRDGCRYC 510
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 179 KTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTL 289
K C C K + E + +HK CF C C +L
Sbjct: 520 KQCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSL 556
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 179 KTCARCEKTVYP-TEELKCLDKVWHKGCFKCQEC 277
K C C + + L+ WH+ CF+C C
Sbjct: 400 KECFACGQMIDSGASRLEYSGNFWHENCFRCANC 433
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 173 MNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTY 304
+ C C + VY E L +++H+ CF+C C+ +L TY
Sbjct: 607 LGTACLICGERVYLMERLVAERRLFHRACFRCSRCNSSLRAGTY 650
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 37.1 bits (82), Expect = 0.011
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 170 KMNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLN 292
K CA C + L +D+ WH C KC +C + L+
Sbjct: 243 KQQAVCAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLD 283
Score = 35.9 bits (79), Expect = 0.025
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Frame = +2
Query: 179 KTCARCEKTVYPTE-ELKCLDKVWHKGCFKCQECSMTLNMRTYXGY-GKLPYC------- 331
K C+ C + + E ++ D+V+H CF C C L Y G G YC
Sbjct: 308 KKCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKEDYEEL 367
Query: 332 ---EAHVPKAKPTTMAETPELKRIAENTKLQSNVKYHADFERSKGKFTQVADD-PETLR 496
E+ P + P +RIA + +N+ Y D G+ T AD P+ +R
Sbjct: 368 LREESRNPTKINSLSKGRPRKRRIATAIESITNLGY--DLSDRPGELTTGADGRPKRVR 424
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYC 331
CA C++ ++ + + D WH F C EC L Y PYC
Sbjct: 143 CAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYC 191
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRT--YXGYGKLPYCEAHVPKAKP 358
C CE + +K + WH C KC CS L Y GK+ YC+A +
Sbjct: 102 CVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKI-YCKADYARQFG 160
Query: 359 TTMAETPELKRIAENTKLQSNVKYH 433
T A + + N YH
Sbjct: 161 TKCARCGRSIHANDWVRRAKNCVYH 185
Score = 32.7 bits (71), Expect = 0.23
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Frame = +2
Query: 185 CARCEKTVYPTEELK-CLDKVWHKGCFKCQECSMTLNM-RTYXGYGKLPYCEAHVPKAKP 358
CARC ++++ + ++ + V+H CF C C L+ + C+ H +A
Sbjct: 163 CARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKLHYLEALD 222
Query: 359 TTMAETPELKRIAENTKLQSNVKYHADFERSKGKFTQVADDPETLRI-KANTKIISNVAY 535
T+ AE + + + + R K K + + L+I +AN I SN
Sbjct: 223 TSPAER-DYQEVFSPDVDGDDSPNSLKSGRHKAKRVRTTFTEDQLQILQANFNIDSNPDG 281
Query: 536 HGDLEKKAQM 565
DLE+ AQ+
Sbjct: 282 Q-DLERIAQL 290
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 35.1 bits (77), Expect = 0.043
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 179 KTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTL 289
+ C C + + L+ L WH+GC KC+ C L
Sbjct: 15 RLCRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRL 51
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 158 LKPFKMNKTCARCEKTVYPTE-ELKCLDKVWHKGCFKCQECSMTL 289
L+ F + C+ C K + E ++ + +H CF CQ C L
Sbjct: 72 LRLFGIPGVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRL 116
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +2
Query: 167 FKMNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTY 304
F+ N+ C C K+V E + + V+HK CF C C++ LN Y
Sbjct: 240 FESNR-CDSCGKSVDILERVAVENHVFHKACFVCAICNVWLNHFNY 284
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 34.7 bits (76), Expect = 0.057
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 185 CARCEKTVYPTE-ELKCLDKVWHKGCFKCQECSMTL--NMRTYXGYGKLPYCEAHVPKAK 355
CA C K + TE +K L KV+H CF C C L R + G+L +CE P
Sbjct: 708 CAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRL-FCENDDPNLL 766
Query: 356 PTTMAETPELK 388
+ T + K
Sbjct: 767 KQQLHVTKQTK 777
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 34.7 bits (76), Expect = 0.057
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCE 334
CA C K + + L K WH F C C L + + PYCE
Sbjct: 282 CAACNKPIIG-QVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCE 330
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCE 334
CA C + TE + K +H CF+C C L+ Y +L YC+
Sbjct: 11 CATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERLSTDFYARGSEL-YCK 59
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 170 KMNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYC 331
K +K CA C + + L + WHK CF C C +L + YC
Sbjct: 46 KFSKRCASCGEPLLEGGVLYN-GETWHKACFSCYFCHRSLASAAFSVRDGCRYC 98
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 179 KTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTL 289
K C C K + E + +HK CF C C +L
Sbjct: 108 KQCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSL 144
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 155 GLKPFKMNKTCARCEKTVYPTEE-LKCLDKVWHKGCFKCQECSMTLNMRTY 304
G + +K CA C P E+ + K +H CF C EC + + +
Sbjct: 166 GCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQF 216
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Frame = +2
Query: 182 TCARCEKTVYPTE-----ELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCEAH-V 343
TC RC V P + E D WH CF C+E L Y YC H
Sbjct: 79 TCKRCNGPVNPGDMALFAERLGPDSCWHVKCFTCEEDGELLVDLIYCSKDDEIYCCRHWG 138
Query: 344 PKAKP 358
K KP
Sbjct: 139 EKLKP 143
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 185 CARCEKTVYPTEEL--KCLDKVWHKGCFKCQECSMTLNM-RTYXGYGKLPYCEAHVPK 349
C+ C+KT+ P EL + L V+H CF C C L + + YC+A K
Sbjct: 7 CSGCKKTI-PANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADFAK 63
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +2
Query: 185 CARCEKTVYPTEEL--KCLDKVWHKGCFKCQECSMTLNM-RTYXGYGKLPYCEAHVPK 349
C+ C+KT+ P EL + L V+H CF C C L + + YC+A K
Sbjct: 105 CSGCKKTI-PANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADFAK 161
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 31.1 bits (67), Expect = 0.70
Identities = 33/147 (22%), Positives = 58/147 (39%), Gaps = 8/147 (5%)
Frame = +2
Query: 158 LKPFKMNKTCARCEKTVYPTE-ELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLP-YC 331
+ P CA+C + ++ +K++H CF+C CS L + +C
Sbjct: 75 IDPVLFGTKCAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFC 134
Query: 332 EA-HVPKAKPTTMAETPELKRIAENTKL---QSNVKYHADFERSKGKFTQVADDPETLRI 499
+A H K T A+ ++ + + Q+N + D SK K D P +R
Sbjct: 135 KADHEIVEKATATAQATHVRNNGQRSSQSGGQTNGQTTPDSTPSKRK----TDRPTRVRT 190
Query: 500 KANTKIISNV--AYHGDLEKKAQMERQ 574
N K + + Y+ + A M+ Q
Sbjct: 191 VLNEKQLHTLRTCYNANPRPDAMMKEQ 217
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 212 PTEE--LKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCEAH 340
P E+ + L K WH F C +C Y L YCE H
Sbjct: 87 PVEDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETH 131
>SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 717
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 143 LSAIGLKPFKMNKTCARCEKTVYPTEELKCLDKVWHKG--CFKCQEC 277
L G K FK CA C KT + + LK +V H G FKC+EC
Sbjct: 509 LKHTGEKKFK----CAHCPKTFFSSSSLKIHVRV-HTGDRPFKCKEC 550
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Frame = +2
Query: 140 YLSAIGLKPFKMNKTCARCEKTVYP---TEELKCLDKVWHKGCFKCQECSMTLNMRTYXG 310
YL ++ FK TC C+KT+ T+ L D+ C C+ + + +
Sbjct: 67 YLCSVNFTLFKRKSTCRGCKKTLCSNCFTQGLNARDQ--SPRCITCRALAAPSTHKDFLQ 124
Query: 311 YGKLPYCEAHVPKAKPTTMAETPELKRIAENTKLQSNVKYHADFER 448
Y K+ + + + K M++ E + + E S + + DF R
Sbjct: 125 YLKIKDLQDFL-RLKNIPMSQCKEKRDLIELILQYSQPRRYPDFPR 169
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 383 LKRIAENTKLQSNVKYHADFERSKGKFTQVAD-DPETLRIKANTKIISNVAY-HGDLEKK 556
+K + K N+K D+E+SK FTQV + DP+ + KI++ + H EKK
Sbjct: 1052 IKALFRRGKALLNLK---DYEKSKEDFTQVLELDPKNREAREQLKIVNGMLKDHHQKEKK 1108
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/102 (21%), Positives = 45/102 (44%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCEAHVPKAKPTT 364
C C+K + +++V +K FKC +C+ + R + K+ C + + +
Sbjct: 529 CNYCKKIFTKYGMKEHIEQVHNKPGFKCAQCNQMIPSRQMRCHAKI--CFSASQQMQNNQ 586
Query: 365 MAETPELKRIAENTKLQSNVKYHADFERSKGKFTQVADDPET 490
M E K++ EN + N +++ + SK + +P T
Sbjct: 587 MLRAQE-KQVTENRCKRCNERFNTFSDLSKHLDSDHEIEPRT 627
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 176 NKTCARCEKTVYPTEELKC--LDKVWHKGCFKCQEC 277
N TCA C + + + + L + WH CF C C
Sbjct: 2028 NVTCASCSQPIRKSMAVYVSELKRYWHDDCFSCVVC 2063
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Frame = +2
Query: 182 TCARCEKTVYPTE-----ELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYCEAH 340
TC RC V P + E D WH CF C+E L Y YC H
Sbjct: 192 TCKRCNGPVNPGDMALFAERLGPDSCWHVKCFTCEEDGELLVDLIYCSKDAEIYCCRH 249
>SB_52134| Best HMM Match : C1_1 (HMM E-Value=1.8)
Length = 154
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 170 KMNKTCARCEKTVYPTEELKCLDKVWHKGCFK 265
K++K CA C TVY E+ K D + H+ C K
Sbjct: 53 KVDK-CAVCGTTVYQMEKCKFDDCILHRQCMK 83
>SB_45976| Best HMM Match : MBT (HMM E-Value=0)
Length = 839
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 350 AKPTTMAETPELK-RIAENTKLQSNVKYHADFERSKG 457
A+P+ + E +K + +NT LQSN K H D + KG
Sbjct: 88 AQPSIVPEKMGVKSELEKNTNLQSNGKEHLDDDEMKG 124
>SB_21061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 155 GLKPFKMNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMR 298
GLKP++ C C+K ++ ++ + FKC +C M+ R
Sbjct: 483 GLKPYR----CRLCDKYFAQRSLVRSHERTHQEKPFKCSDCKMSFRQR 526
>SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1239
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRT 301
C C + +EE + H+G FKC +C MT R+
Sbjct: 1089 CEECPRKC-DSEETFLMHMRLHEGSFKCPKCPMTFPRRS 1126
>SB_50683| Best HMM Match : Nop10p (HMM E-Value=2.6)
Length = 201
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 1 GHIFGMRVRGCYENRAPECFLKKVISKV 84
GH+FG+ G ++ +A C L KV+ K+
Sbjct: 77 GHLFGVPFDGPHDAQADACALAKVLMKI 104
>SB_31845| Best HMM Match : Arm (HMM E-Value=3.2e-13)
Length = 771
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 401 NTKLQSNVKYHADFERSKGKFTQVADDPETLRIKANTKII 520
N ++ N HA K ++ ADD + RIKA K++
Sbjct: 289 NQSIRMNENQHATNREDKDSTSKEADDDQVKRIKAAQKLV 328
>SB_8440| Best HMM Match : RVT_1 (HMM E-Value=4.3e-18)
Length = 878
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 179 KTCARCEKTVYPTEELKCLDKVWHKGCFKC 268
KTCARC + P E C K + K CFKC
Sbjct: 45 KTCARCGSSHKPKE---C--KAFGKECFKC 69
>SB_53497| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 462
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 185 CARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKL 322
C +CE E LK KV + +KC+EC + Y YG L
Sbjct: 203 CGKCEMRFTQHEMLKTHLKVHDEKPYKCKECD-----KCYTHYGSL 243
>SB_19016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 273
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -1
Query: 537 WYATLLMIFVFALILKVSGSSATCV-NFPLLLSKSAWYFTLLCSFVFSA 394
W A++L + +AL+L V S C+ ++P + +A Y + F+F A
Sbjct: 94 WIASILCVIPYALVLNVDNHSKFCIEDWP---APTATYRLIYTVFIFIA 139
>SB_12220| Best HMM Match : RVT_1 (HMM E-Value=7.3e-19)
Length = 2253
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 179 KTCARCEKTVYPTEELKCLDKVWHKGCFKC 268
KTC RC+ + P E C K + K CFKC
Sbjct: 578 KTCGRCDSSHKPKE---C--KAFGKECFKC 602
>SB_57398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 528 TLLMIFVFALILKVSGSSATCVNFPLLLSKSAWYFTLLCSFVFSAI 391
TLL V L+ V + V LL S WY T +C + + +
Sbjct: 436 TLLASVVGTLLASVGHTLLASVGHTLLASVCGWYLTGICGWYLTGV 481
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = +2
Query: 170 KMNKTCARCEKTVYPTEELKCLDKVWHKGCFKCQECSMTLNMRTYXGYGKLPYC 331
K C C+K + + + + +H F C C LN T+ PYC
Sbjct: 20 KRGTLCYSCQKPI-TGRCITAMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 72
>SB_19544| Best HMM Match : Ribosomal_S18 (HMM E-Value=4.9)
Length = 208
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 187 CEVRENSLSYRGIEMFGQGLAQGLLQMPRVQYDLEHENVXGLREA 321
CE R+ +SY G + QG++ ++ +Q ENV LR+A
Sbjct: 108 CEFRKKKISYFGHVINQQGISPNPEKVRAIQALAAPENVSELRQA 152
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,921,706
Number of Sequences: 59808
Number of extensions: 338308
Number of successful extensions: 985
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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