Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a17f
         (591 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    26   0.24 
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    24   0.97 
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    23   2.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.0  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   3.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.2  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   5.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.2  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   6.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   6.8  
AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    21   9.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.0  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 470 VADDPETLRIKANTKIISNVAYHGDLEK 553
           VA + +TL++  + KII N+AY G + +
Sbjct: 345 VAQNEKTLQMIISVKIIQNLAYSGRMNR 372


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 440 FERSKGKFTQVADDPETLRIKANTKIISN 526
           FE        +  DPETL+  +  KIIS+
Sbjct: 339 FEYGGNNIEIIVKDPETLQFPSGMKIISS 367


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 239 KVWHKGCFKCQECSMTLNMRTYXGYGKLPYCEA 337
           K+ ++ C K Q+CS+    R    Y +L  C A
Sbjct: 49  KIQYRPCTKNQQCSILRINRNRCQYCRLKKCIA 81


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 239 KVWHKGCFKCQECSMTLNMRTYXGYGKLPYCEA 337
           K+ ++ C K Q+CS+    R    Y +L  C A
Sbjct: 98  KIQYRPCTKNQQCSILRINRNRCQYCRLKKCIA 130


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 140 YLSAIGLKPFKMNKTCARCEKTVYPTE 220
           Y + +GL     N     CEKT+ P E
Sbjct: 452 YQTKVGLITILRNHKVEVCEKTIIPYE 478


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -2

Query: 362 SSVSLSVR--ELHNKAASRSPXTFSCSRSYCTLGI 264
           + ++L VR  ++HN    ++   F  S  YC + I
Sbjct: 150 AKLALGVRLPDIHNSVTGKTTACFEPSLDYCVVKI 184


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 185 CARCEKTVYPTEELKCLD 238
           C +CE+  Y  +E  C+D
Sbjct: 470 CDQCEEYEYVHDEYTCMD 487


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -1

Query: 138 NKSTTLSQSNTSNHDSRTNFRYNFFKETLRSTIFVASPYAHAKN 7
           N    L +S    H+ +  F Y+F  E  R     +  Y H KN
Sbjct: 23  NSPRNLEKSLNVIHEWKY-FDYDFGSEERRQAAIQSGEYDHTKN 65


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 185 CARCEKTVYPTEELKCLD 238
           C +CE+  Y  +E  C+D
Sbjct: 560 CDQCEEYEYVYDEYTCMD 577


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 140 YLSAIGLKPFKMNKTCARCEKT 205
           YL   G K ++M ++C  C+++
Sbjct: 60  YLQVSGSKIWQMERSCMCCQES 81


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 344 PKAKPTTMAETPELKRIAEN 403
           PK    +M  TPE+K+  E+
Sbjct: 279 PKGSKCSMITTPEIKKEVED 298


>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -1

Query: 426 FTLLCSFVFSAIRFNSGVSAIVVGFAFG 343
           +TL   FV        G S +  GFA G
Sbjct: 85  YTLFKGFVHLGAGLAVGFSGLAAGFAIG 112


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 251 KGCFKCQECSMTLNMRTYXGYGKLPY 328
           K C K   CS  L + T    G+ PY
Sbjct: 207 KACGKGFTCSKQLKVHTRTHTGEKPY 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,899
Number of Sequences: 438
Number of extensions: 2693
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)