Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a11r
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    26   0.30 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 371 PPHCGPA-GSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMS 520
           PP    A GSKPV    +P  W P   T+   +   +  T  + PPA  +S
Sbjct: 415 PPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTT--EAPPAPAVS 463


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -3

Query: 293 STPAVMPTSTRMAAGTPNPDAGSTP 219
           ++PA  P S     G P P   ++P
Sbjct: 209 ASPAAAPRSVATPTGIPTPSTSASP 233


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 182 VFVLTTWLEDAVVTSGKPSFPTAMVEL 102
           +F++T W+  AV  S    F   M+ L
Sbjct: 87  IFIVTVWMTGAVKHSKIAHFLNKMIRL 113


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 177 RTNHLVGRRCGNIWEAE 127
           R +HLV  +CG   EAE
Sbjct: 258 RRHHLVHHKCGGEEEAE 274


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 340 TSIAVECVRVSSPLWSGGVQ 399
           + IA EC R  +P   GGVQ
Sbjct: 38  SDIADECERFLAPKGFGGVQ 57


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 340 TSIAVECVRVSSPLWSGGVQ 399
           + IA EC R  +P   GGVQ
Sbjct: 39  SDIADECERFLAPKGFGGVQ 58


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 350 RLSALEFPPHCGPAGSKPVTRAGRPP 427
           +L  LE PP   P  +K   R  RPP
Sbjct: 243 QLKELENPPTPKPRPTKVSRRKPRPP 268


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 57  RGRIRASQSFRCPYAKFHH 113
           RGR+ A+ +     A FHH
Sbjct: 175 RGRVAAAAAMVAETASFHH 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,480
Number of Sequences: 336
Number of extensions: 4144
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)