Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a11r
(640 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 33 0.14
01_01_1143 - 9064210-9065682 33 0.14
03_02_0340 + 7635354-7635621,7635992-7636121,7636865-7636929,763... 33 0.19
02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133 32 0.44
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 30 1.8
02_01_0216 + 1427490-1427789 30 1.8
02_01_0214 + 1420112-1420402 30 1.8
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 29 2.4
07_03_1107 - 24024387-24024497,24025799-24026410 29 2.4
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284... 29 2.4
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 29 3.1
06_01_0410 + 2928382-2930973 29 3.1
02_02_0249 - 8288401-8288787 29 3.1
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 3.1
11_06_0202 - 21184217-21184503,21184622-21184982 29 4.1
09_04_0108 + 14657020-14657193,14659040-14659355,14659728-146598... 29 4.1
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 29 4.1
07_03_0451 + 18340166-18340533,18340576-18341006,18343057-183431... 29 4.1
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634... 29 4.1
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 29 4.1
05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107 29 4.1
04_04_0977 + 29851086-29851463,29852054-29852551,29853665-298537... 29 4.1
07_01_0479 + 3606663-3607448 28 5.4
05_07_0256 + 28713134-28713964 28 5.4
12_02_1219 + 27096477-27096590,27096704-27097078 28 7.2
11_07_0002 - 27171791-27172222 28 7.2
11_03_0067 - 9535565-9536157,9536446-9536757,9536948-9537212,953... 28 7.2
10_07_0116 - 13022648-13022701,13022781-13022835,13023050-130231... 28 7.2
10_02_0004 - 4055613-4055903 28 7.2
09_02_0279 + 6702517-6702948 28 7.2
04_03_0904 + 20717005-20718087 28 7.2
01_05_0222 + 19462487-19462663,19462916-19462991,19463106-194631... 28 7.2
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 27 9.5
12_01_0977 - 9900073-9900521,9900594-9900698,9900770-9900959,990... 27 9.5
11_04_0011 - 12147113-12147278,12148216-12149145,12149463-121498... 27 9.5
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507... 27 9.5
08_02_0191 + 14041201-14043894,14044354-14044632 27 9.5
06_01_1023 - 7996240-7996369,7997166-7997260,7997430-7997515,799... 27 9.5
06_01_0820 + 6202348-6203313 27 9.5
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 27 9.5
01_06_1050 + 34125087-34126001,34126082-34126639 27 9.5
01_05_0711 - 24495399-24495595,24495733-24495826,24495906-244959... 27 9.5
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 33.5 bits (73), Expect = 0.14
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Frame = -2
Query: 435 RQAGGRPARVTGLDPAGPQWGGNSNALNRNAGHYVECIHTDGRALGIFNPSGDA-DFYPN 259
RQA G+ TG+ ++ +N+L+ I L + SGD +F+P
Sbjct: 518 RQAMGQFEHFTGMPVVDCKFRALANSLDNPDAMKAAGITAHKARLWLHERSGDLIEFHPR 577
Query: 258 GGRNPQPGCRINTCSHGRATELMASSVRTNHLVGRRCGNI-WEAELSNCNGGTLHMGNGN 82
GR QPG G + +A++ H + G++ + + G+ +G N
Sbjct: 578 SGRGMQPGHGGALYHFGTSGAAVAAATAVTHPLA--LGSVRYSSSSVGLGNGSKEIGLQN 635
Query: 81 FGKRGSGL 58
+G SGL
Sbjct: 636 WGADDSGL 643
>01_01_1143 - 9064210-9065682
Length = 490
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -2
Query: 567 AGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGRPARVTGLDPA 388
AG P V ALG L ++ + GG +++G + N G AG + + G+ A
Sbjct: 403 AGGPGVNPALGQALTAILASQGGGLGLNNILGVGANGSGLPNPGASAGLGSSGLPGMPGA 462
Query: 387 GPQWGG 370
G GG
Sbjct: 463 GGYLGG 468
>03_02_0340 +
7635354-7635621,7635992-7636121,7636865-7636929,
7637255-7637529,7640204-7640441,7641095-7641228,
7641340-7641414,7641675-7641776,7642154-7642263,
7642334-7642430
Length = 497
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 388 GGVQTCNAC-GATTGLASGITNDVST*TEANKMHLVPIASSIVDEPNQKVAEGATDIR 558
GGV+ AC A G + V+ ++ +HLVPI+ S D ++ V G TD+R
Sbjct: 235 GGVRVDGACEAAVNGCTGKMGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRVGHTDVR 292
>02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133
Length = 474
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -3
Query: 386 DHSGEETLTHSTAMLVITSNASTRTGVLLVFSTPAVMPTS---TRMAAGTPNPDAGSTP 219
D +G++T+ H+TA+ + + AS+ + + P+V+P + R + P DA S P
Sbjct: 129 DGTGKDTIEHATALGGLKATASSDVAPVPIDDVPSVVPAANAPVRSSPVMPAADAASAP 187
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +2
Query: 308 RPSVWMHST**PALRLSALEFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCT 487
RP + +H T P L + + PP P S T PPA P +PT AP T
Sbjct: 262 RPLLLLHCTLAPHLCVPRVLSPP--APMPSALATHVPTPPAPAPPVPTPLAP-------T 312
Query: 488 WFQLPPALLMSQT 526
+PP MS T
Sbjct: 313 PADVPPGFTMSPT 325
>02_01_0216 + 1427490-1427789
Length = 99
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 151 ASSNQVVSTNTGCH*FSGATV*AGVDPASGLGVPAAIRVEVGITAGV 291
AS++ V G GA V AG D A G+G AA G+ AG+
Sbjct: 27 ASAHVGVGAGAGADAGVGAAVGAGADAALGVGAGAAGAAGAGVGAGI 73
>02_01_0214 + 1420112-1420402
Length = 96
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 151 ASSNQVVSTNTGCH*FSGATV*AGVDPASGLGVPAAIRVEVGITAGV 291
AS++ V G GA V AG D A G+G AA G+ AG+
Sbjct: 24 ASAHVGVGAGAGADAGVGAAVGAGADAALGVGANAAGAAGAGVGAGI 70
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 255 GRNPQPGCRINTCSHGRATELMASSVRTNHL 163
G++ +PGC +NTC+H RA L SV +
Sbjct: 264 GKDGRPGCVMNTCAH-RACPLHLGSVNEGRI 293
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +2
Query: 374 PHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMSQTKKLPRARPT 553
P P + P A PPA P P T AP P + PP P+A
Sbjct: 46 PAAAPTTTTPPA-ASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKSTKAPAPAPKAAKA 104
Query: 554 SGTPAAA 574
+ PA++
Sbjct: 105 TPPPASS 111
>05_07_0228 -
28526885-28527046,28527151-28527241,28528315-28528455,
28528560-28528625,28529180-28529317,28529759-28529860,
28530156-28530236,28530314-28530383,28530598-28530674,
28531035-28531483
Length = 458
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -2
Query: 597 LANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGR 418
+ N T + V D + +F+ + GG+ NQ++L+G S GAH+ A + +
Sbjct: 225 IGNFPQGTISDMVSDASDGI-SFVCETVGAYGGDPNQIYLMGQSAGAHIAACALLEQAAK 283
Query: 417 PAR 409
+R
Sbjct: 284 ESR 286
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 29.1 bits (62), Expect = 3.1
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Frame = -2
Query: 348 NAGHYVECIHTDGRALGIFNPSGDADFYPNGGRNPQPGCRINTCS-HGRATELMASSVRT 172
N G Y H G G SG A NGG G +CS G + + +S+
Sbjct: 74 NGGSYTASGHGLGLGSGYGYGSGSAYGAGNGGSASGCGSGSTSCSGSGSGSVGLGTSINV 133
Query: 171 NHLVGRRCGNIWEAELSNCNGGTLHMGNGNFGKRGSGLYGLRTR 40
VG G ++ +G G+ GSG R+R
Sbjct: 134 GVGVGANGGTNGGSDCDTGSGSNYGSSTGSSSGYGSGGVSYRSR 177
>06_01_0410 + 2928382-2930973
Length = 863
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 356 SALEFPPHCGPAGSKPVTRAGRPPA--WRPALP 448
S LE P HC GS V RA PP WR A+P
Sbjct: 365 STLEVPYHCFVLGS--VCRASSPPVPLWRVAVP 395
>02_02_0249 - 8288401-8288787
Length = 128
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = -1
Query: 442 CRTP-SRWSPRTRYRFGPRRTTVGRKL*RTQPQCWSLRRMHPHGRACSWYFQPQR*CRLL 266
CR P S + R TT + PQ W LRR P W+ +R R +
Sbjct: 14 CRAPWINSSGLGKRRIDDGHTTGSSRFDGCAPQEWRLRR--PQSPGTKWWIDRRRHAREV 71
Query: 265 PEWRQEPPTRMPDQHLLTRSR 203
W+ + R D+ + + R
Sbjct: 72 ANWQSKRCARGGDESTIQQPR 92
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.1 bits (62), Expect = 3.1
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +2
Query: 371 PPHCGPAGSKPVTRAGRPPAWRPALPTT*AP-KLKPIRCTWFQLPPALLMS-----QTKK 532
PP P+ S T + PPA RPALP T AP + P T QL PA S +
Sbjct: 138 PPAKAPSHSHAKTPS-MPPAERPALPPTKAPAAISP--ATPPQLSPANAHSTHHHAKPPS 194
Query: 533 LPRARPTSGTPA 568
LP A P +P+
Sbjct: 195 LPPAEPPVPSPS 206
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +2
Query: 365 EFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APK---LKPIRCTWFQLPPALLMSQTKKL 535
E PP P+ A P A RPA+P PK + P++ Q PPA
Sbjct: 208 EHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPP--QRPPAPATKPPPSF 265
Query: 536 -PRARPTSGTPAAA 574
P+ PT PA A
Sbjct: 266 PPQLAPTMPPPAHA 279
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/79 (27%), Positives = 28/79 (35%)
Frame = +2
Query: 341 PALRLSALEFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMS 520
P S+ + PP G P + P P+LP P P + LPP
Sbjct: 127 PPYEPSSPQQPPSAGKLAESPAATPAQSPTAAPSLPQAPKPSSPPPFTSPSPLPPPPPPP 186
Query: 521 QTKKLPRARPTSGTPAAAV 577
+ A GT AAAV
Sbjct: 187 TSHGARGATMGIGTVAAAV 205
>09_04_0108 +
14657020-14657193,14659040-14659355,14659728-14659887,
14661265-14661725,14663778-14663856,14664732-14664882,
14665414-14665467,14665724-14665888
Length = 519
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = -2
Query: 615 VVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINN----AGGNWNQVHLIGFSLGAHVV 448
+VDW L S+ + DV + NFLV LIN+ +V ++G G H
Sbjct: 124 IVDWPGLGYSDRPSLNYNA-DV---MENFLVQLINSPNSPVANTDGEVVVVG---GGHAA 176
Query: 447 GNAGRQAGGRPARVTGLDPAGPQWGG 370
A R AG R +G+ P W G
Sbjct: 177 TIAVRAAGKGLIRPSGIAAVAPTWAG 202
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 506 ALLMSQTKKL-PRARPTSGTPAAAVL*FELASLCQSTTMT 622
+L+ S T+ L P+A PTS AA V +L SLC T
Sbjct: 527 SLISSNTENLSPQALPTSSESAAGVTIDDLRSLCSQEFFT 566
>07_03_0451 +
18340166-18340533,18340576-18341006,18343057-18343184,
18343329-18343958,18344761-18345480
Length = 758
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 230 GSTPAHTVAPLN*WHPVFVLTTWLED 153
GSTP H A L W V +L+ W D
Sbjct: 342 GSTPLHLAASLEGWPYVGILSKWFPD 367
>05_07_0323 +
29260608-29260836,29262242-29262513,29263349-29263487,
29263581-29263714,29263847-29263970,29264364-29264773
Length = 435
Score = 28.7 bits (61), Expect = 4.1
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = -2
Query: 534 NFLVWLINNAGGNWNQVH-LIGFSLGAHVVGNAGRQAGGRPAR-VTGLDPAGPQWGGNSN 361
N + W NNA N +H LI LG++ AG Q R AR T +P
Sbjct: 307 NLVEWAHNNA--NDRSIHRLIDPGLGSNF-SMAGAQILARTARSCTRQNP-------RDR 356
Query: 360 ALNRNAGHYVECIHTDGRALGIFNPSGDADFYPNGGRNPQP 238
L H +E +HTD RA + S P+ NP P
Sbjct: 357 PLMSEVVHTLETLHTDQRANATTSYSYSQSQPPSPSANPSP 397
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +1
Query: 253 AAIR--VEVGITAGVENTKSTPVRVDAFDV-MTSIAVECVRVSSPLWSGGVQTCN--ACG 417
A+IR V V A V K RV A + + + C SS L +GG C C
Sbjct: 2 ASIRSCVSVNPAAAVTPVKYKSARVGAAGLDPKGLRISCSSSSSSLAAGGGDGCRDAGCA 61
Query: 418 ATTGLASGITNDV 456
+++G SG+ V
Sbjct: 62 SSSGRGSGVVGSV 74
>05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107
Length = 151
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +1
Query: 352 VECVRVSSPLWSGGV----QTCNACG 417
VEC ++P+W GG CNACG
Sbjct: 28 VECGATTTPMWRGGPTGPRSLCNACG 53
>04_04_0977 +
29851086-29851463,29852054-29852551,29853665-29853754,
29854369-29854491
Length = 362
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 605 GTDLLIQTTILPPLASRMSVAPSATFWFGSSTMLEAIGTK 486
G D+LI T A+ +V P A+F FG++ A GT+
Sbjct: 10 GGDVLIYDTFNASAAAAAAVVPPASFLFGNNNAGGAAGTE 49
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 371 PPHCGPAGSKPVTRAGRPPAWRPALP 448
PP GP +P G PP RP +P
Sbjct: 212 PPPMGPPQVRPGMPGGPPPGMRPGMP 237
>05_07_0256 + 28713134-28713964
Length = 276
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 305 LLVFSTPAVMPTSTRMAAGTPNPDAGSTPAHTVAPLN*WHPVFVL 171
L + S T+ A + + AGSTPA T AP P+F++
Sbjct: 76 LSISSNHGTTTTAAAAAVSSDSAGAGSTPASTTAPPAASFPLFIV 120
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = -2
Query: 198 ELMASSVRTNHLVGRRCGNIWEAELSNCNGGTLHMGNGNFGKRGSGLYGLRTRNAW 31
EL ++ N RR G GG + G G +G G G YG R +
Sbjct: 73 ELDGRNITVNEAQSRRSGGGGGGGYGQRGGGGGYGGGGGYGGGGGGGYGQRREGGY 128
>11_07_0002 - 27171791-27172222
Length = 143
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 392 PPDHSGEETLTHSTAMLVI-TSNASTRTGVLLVFSTPAVMPTSTRMAAGTPNPDAGSTP 219
PP SG T T + T +++ T STPA + S A G+P +GSTP
Sbjct: 34 PPSSSGARTPTSGGSPGGSGTRSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTP 92
>11_03_0067 -
9535565-9536157,9536446-9536757,9536948-9537212,
9537810-9538048,9538400-9538568,9539216-9539410,
9539649-9539766,9542140-9542315
Length = 688
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 507 AGGNWNQVHLIGFSLGAHVVGNAGRQAGGRPAR 409
AGG W + H G ++ GN GR GG+ AR
Sbjct: 2 AGGRWIR-H--GMAMSVVATGNCGRSVGGQEAR 31
>10_07_0116 -
13022648-13022701,13022781-13022835,13023050-13023175,
13023274-13023340,13024104-13024200,13024362-13024461,
13024527-13024611,13024679-13024755,13024888-13024926,
13025001-13025038,13025118-13025208,13025536-13025628,
13025726-13025781,13025844-13025915,13026078-13026134,
13026397-13026495,13026599-13026964
Length = 523
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = -3
Query: 443 MPDAKPVVAPHALQVWTPPD---HSGEETLTHSTAMLVITSNASTR---TGVLLVFSTPA 282
M D + + H PD ++ +TH VI S ++ R T VLL+ S P
Sbjct: 1 MADVEACLLAHLNSGGEVPDSRSYASSLRVTHDELEAVIKSLSAFRIVDTTVLLLPSPPL 60
Query: 281 VMPTSTRMAAGTPNPDAGSTP 219
P S ++ G PNP+ S P
Sbjct: 61 SSP-SPNLSPGLPNPNELSAP 80
>10_02_0004 - 4055613-4055903
Length = 96
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 277 CRLLPEWRQEPPTRMPDQHLL 215
C LLP RQ PPT P + LL
Sbjct: 14 CPLLPHRRQRPPTAPPRRRLL 34
>09_02_0279 + 6702517-6702948
Length = 143
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -3
Query: 392 PPDHSGEETLTHSTAMLVI-TSNASTRTGVLLVFSTPAVMPTSTRMAAGTPNPDAGSTP 219
PP SG T T + T +++ T STPA + S A G+P +GSTP
Sbjct: 34 PPSSSGARTPTSGGSPGGSGTRSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTP 92
>04_03_0904 + 20717005-20718087
Length = 360
Score = 27.9 bits (59), Expect = 7.2
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Frame = +2
Query: 371 PPHCGPAGSKPVTRAGRPPAWRPALPT------T*APKLKPIRCTWFQLPPALLMSQTKK 532
P H P KP + +PPA+ P PT T PK P T PPA +
Sbjct: 54 PHHHEPKPEKP-PKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTY 112
Query: 533 LPRARPTSGTP 565
P P TP
Sbjct: 113 TPTPTPPKPTP 123
>01_05_0222 +
19462487-19462663,19462916-19462991,19463106-19463185,
19463293-19463342,19463436-19463520,19463640-19463738,
19464110-19464346
Length = 267
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 555 DVGRALGNFLVWLINNAGGNWNQVHL 478
D+G G FL+WL N+G N + L
Sbjct: 81 DIGCGSGRFLIWLAKNSGERRNYLGL 106
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 114 NGGTLHMGNGNFGKRGSGLYGLR 46
+GG G G FG+ G G YG R
Sbjct: 479 SGGFDSFGGGGFGREGGGSYGRR 501
>12_01_0977 -
9900073-9900521,9900594-9900698,9900770-9900959,
9901035-9901093,9901297-9901688,9901770-9902059,
9902146-9903030
Length = 789
Score = 27.5 bits (58), Expect = 9.5
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +2
Query: 341 PALRLSALEFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMS 520
P +R S+ + P P G +P A P + A PT + + T P S
Sbjct: 385 PKIRTSSRK-PSDIDPTGKEPDPAATEPNLSKDAEPTAESQPTAESQPTAESQPTGAQAS 443
Query: 521 QTKKLPRARPTSGTPAAA 574
K P +P +G +AA
Sbjct: 444 DDKANPSDQPPTGNQSAA 461
>11_04_0011 -
12147113-12147278,12148216-12149145,12149463-12149834,
12149884-12150007,12150343-12150391
Length = 546
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 119 LESSASQMLPQRLPTKWLVRTLDAINSVARPCEQVLIRHPGWGFLPPFG*KSASPLGLKI 298
+E+S ++++PQR T+W +R + A + + GW +P F S +G+ +
Sbjct: 401 IENSNNELIPQRTFTRWRMRIDYRKLNKAIKKDHFPLPFIGWRTIPSF----VSLMGIMV 456
Query: 299 PRARPSVWM 325
PS+ M
Sbjct: 457 ITKSPSIPM 465
>10_08_0971 -
21949721-21949936,21950051-21950484,21950599-21950791,
21950909-21951007,21951114-21951191,21951275-21951669,
21954317-21954482,21954840-21954927,21955015-21955127,
21955242-21955426,21955840-21955987,21956071-21956349,
21956425-21956529,21956892-21957137,21957367-21957408,
21957539-21957613
Length = 953
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 255 GRNPQPGCRINTCSHGRATELMASSV 178
G++ +PGC NTC+H RA L SV
Sbjct: 264 GKDGRPGCVQNTCAH-RACPLHLGSV 288
>08_02_0191 + 14041201-14043894,14044354-14044632
Length = 990
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 356 SALEFPPHCGPAGSKPVTRAGRPPA--WRPALP 448
S LE P HC GS V R PP WR A+P
Sbjct: 364 STLEVPYHCFVLGS--VCRVSSPPVPLWRVAVP 394
>06_01_1023 -
7996240-7996369,7997166-7997260,7997430-7997515,
7998034-7998184
Length = 153
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 432 QAGGRPARVTGLDPAGPQWGG 370
+AG R R G DP P WGG
Sbjct: 8 EAGRRRRRGGGSDPPSPMWGG 28
>06_01_0820 + 6202348-6203313
Length = 321
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -2
Query: 450 VGNAGRQAGGRPARVTGLDPAGPQWGGNSNALNRNAGHYVECIHTDGRALG-IFNPSGDA 274
VGNA RQ G+ A P GPQ G A N + G + G + NP GDA
Sbjct: 193 VGNAERQCPGQCAWPFAAPPYGPQ-GSPLGAPNGDVGTDGMVVTLASTLAGAVTNPFGDA 251
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 371 PPHCGPAGSKPVTRAGRPPAWRPALPT---T*APKLKP 475
PP GPA P+ A PPA P +PT T AP++ P
Sbjct: 157 PPASGPASRAPLVPA-PPPAPFPPVPTPGMTQAPQMVP 193
>01_06_1050 + 34125087-34126001,34126082-34126639
Length = 490
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 408 VTGLDPAGPQWGGNSNALNRNAGHYVECIHTDGRALGIFNPSGD 277
+TG +PA + +N N + G YV + D GIFN GD
Sbjct: 90 ITG-NPANVEHIVKTNFQNYSKGEYVVSVMEDFLGHGIFNSDGD 132
>01_05_0711 -
24495399-24495595,24495733-24495826,24495906-24495986,
24496130-24496178,24496281-24496366,24496452-24496679,
24496797-24496835,24496911-24497000,24497093-24497155,
24497233-24497302,24497400-24497446,24497544-24497606,
24497702-24497752,24497851-24497934,24498075-24498139,
24498243-24498299,24498409-24498526,24498624-24498674,
24499100-24499186,24499272-24499351,24500663-24500780
Length = 605
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 342 GHYVECIHTDGRALGIFNPSGDADFYPNG 256
G Y +H +G A + N + +YPNG
Sbjct: 572 GAYTSTVHQNGHAKKLANGLSNGTYYPNG 600
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,215,115
Number of Sequences: 37544
Number of extensions: 564828
Number of successful extensions: 2092
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2084
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -