Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a11f
(617 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 67 1e-11
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 65 5e-11
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 54 1e-07
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 32 0.32
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 32 0.32
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 31 0.99
SB_44067| Best HMM Match : Mucin (HMM E-Value=5.4) 31 0.99
SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 30 1.7
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 2.3
SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7) 29 3.0
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_17550| Best HMM Match : WW (HMM E-Value=0.0012) 29 4.0
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 28 5.3
SB_40905| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_35417| Best HMM Match : DTHCT (HMM E-Value=1.7) 28 5.3
SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_25282| Best HMM Match : rve (HMM E-Value=6.3e-12) 28 7.0
SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 27 9.2
SB_52214| Best HMM Match : Alpha_E3_glycop (HMM E-Value=5.1) 27 9.2
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_12466| Best HMM Match : Transferrin (HMM E-Value=4.4e-21) 27 9.2
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05) 27 9.2
SB_38723| Best HMM Match : rve (HMM E-Value=4.7e-13) 27 9.2
SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05) 27 9.2
SB_17748| Best HMM Match : DUF1312 (HMM E-Value=0.0024) 27 9.2
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 66.9 bits (156), Expect = 1e-11
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Frame = +1
Query: 295 RNSH-YRANRGTVVIVHGWNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRLAN--SNYNT 465
RNS +R +R V+I+HG+ +GN ++R L + +NVI VDW A+ + Y+
Sbjct: 14 RNSTAFRGDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHV 73
Query: 466 AAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQ 609
AA VG L + + + +VHLIG SLGAHV G AG +
Sbjct: 74 AAGNTRVVGAQLAELITTIQRVFDFDLRRVHLIGHSLGAHVAGYAGER 121
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 64.9 bits (151), Expect = 5e-11
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Frame = +1
Query: 202 SRSGANNQYWLFTXXXXXXXXVLVNGNINSVRNSHYRANRGTVVIVHGWNNNGNTQMNPL 381
S + + Q+ L+T L +++ R++H+ A+R TV+I+HG+ G T + +
Sbjct: 67 SPASIHTQFMLYTRESPVQYQQLYE-DMDITRDTHFNASRRTVIIIHGFA--GFTTLTSI 123
Query: 382 ----------IRSAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINN 531
+++ L D NVI+VDW R A + A A VG L L
Sbjct: 124 RHEVNWWGFPMKNELLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEER 183
Query: 532 AGGNWNQVHLIGFSLGAHVVGNAGRQ 609
+G VH+IGFS GAHV G GR+
Sbjct: 184 SGRKLAYVHVIGFSFGAHVAGYVGRR 209
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/76 (39%), Positives = 39/76 (51%)
Frame = +1
Query: 382 IRSAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHL 561
IR A + +D NVI DW R A Y A A VG + + +L N G +L
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYL 691
Query: 562 IGFSLGAHVVGNAGRQ 609
+GFSLGAH+ G GR+
Sbjct: 692 VGFSLGAHISGYVGRR 707
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +1
Query: 205 RSGANNQYWLFTXXXXXXXXVLVNGNINSVRNSHYRANRGTVVIVHGWNNNGNTQMNPL 381
R G N + LFT V+ + +++ ++ S Y + T++IVHG+ + + P+
Sbjct: 483 RVGTN--FRLFTRSNPLISNVIDDSDVSKLQASRYDGKKRTIIIVHGFIEHDSVPCPPV 539
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 53.6 bits (123), Expect = 1e-07
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Frame = +1
Query: 232 LFTXXXXXXXXVLVNGNINSVRNSHYRANRGTVVIVHGWNNNGNTQM--------NPLIR 387
L+T VL + + ++ S + +R T IVHG+ + ++
Sbjct: 57 LYTQASPDKYEVLSDADTATIEKSSFLPHRTTRFIVHGYAGLDSVDSIIDLKGWWGIRMK 116
Query: 388 SAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINNAGG-NWNQVHLI 564
L D NVI+VDW R A Y A A VG + F+ +++ +G H I
Sbjct: 117 DELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHSI 176
Query: 565 GFSLGAHVVGNAGRQ 609
GFSLGAH+ G G++
Sbjct: 177 GFSLGAHISGYVGQR 191
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 274 NGNINSVRNSHYRANRGTVVIVHGWNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRLANS 453
+ ++ ++ S Y + T VI HG+ +G+T +R A L DVNV++ DW A+
Sbjct: 87 DSDVKKLKASTYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADG 146
Query: 454 NYNTAAAGVPDVG 492
Y A A VG
Sbjct: 147 MYWQATANTRLVG 159
>SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = -1
Query: 617 PPAWRPALPTT*APKLKPIRCTWFQLPPALLMSQTKKLPRARPTSGTPAA 468
P AW+ A PK KP+ C L P L KL A+ T GT AA
Sbjct: 528 PSAWKMA-DVVPVPKEKPVTCIAKHLRPISLTPTLSKLAEAQATDGTGAA 576
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 32.3 bits (70), Expect = 0.32
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +2
Query: 203 PEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGT--TMATPR*T 376
PE P + T +P+ T AT + TT PTE+ + T G T P T
Sbjct: 370 PETTPALETTSAPEST--------AATESTVAPETTVPTEITAAPETTGAPDTTLAPETT 421
Query: 377 LSSDPPSLPFKT--*MSSLLTGTDLLIQTTILP--PLASRMSVAPSAT 508
++ + P T +++ T T + +TT P LA ++ AP T
Sbjct: 422 VALESTMTPESTVPPETTVATETTVAPETTAAPESTLAPEITAAPDTT 469
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 32.3 bits (70), Expect = 0.32
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +2
Query: 203 PEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGT--TMATPR*T 376
PE P + T +P+ T AT + TT PTE+ + T G T P T
Sbjct: 2066 PETTPALETTSAPEST--------AATESTVAPETTVPTEITAAPETTGAPDTTLAPETT 2117
Query: 377 LSSDPPSLPFKT--*MSSLLTGTDLLIQTTILP--PLASRMSVAPSAT 508
++ + P T +++ T T + +TT P LA ++ AP T
Sbjct: 2118 VALESTMTPESTVPPETTVATETTVAPETTAAPESTLAPEITAAPDTT 2165
Score = 28.7 bits (61), Expect = 4.0
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 167 TCMNPSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSST- 343
T + P T APE T +P+ T +AR + TA T TTAP E S T
Sbjct: 2530 TTVEPETT--LAPETTAAPETTLAPETT--VAREITTAPVTTSVSETTAPPETTASPETT 2585
Query: 344 -DGTTMATPR*TLSSDPPSLPFKT 412
+ T P T++ + + P T
Sbjct: 2586 VEPETTVAPETTVTPEATAAPDTT 2609
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 249 PKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPC-RSRRECHR 425
P S C+R+ +E + R+PR HRP+ + + P + S + R P R R+ H+
Sbjct: 490 PWSSNKDCDRERNSVKEISTTRRPRKSTHRPK--KPTRRPRKNSPRTRKPTRRPRKNTHK 547
>SB_44067| Best HMM Match : Mucin (HMM E-Value=5.4)
Length = 238
Score = 30.7 bits (66), Expect = 0.99
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 335 SSTDGTTMATPR*TLSSDPPSLPFK----T*MSSLLTGTDLLIQTTILPPLASRMSVAPS 502
++T T T T+++ PPSLP + T S+ +TG L T + + RMS PS
Sbjct: 161 AATTSATNTTATMTIANTPPSLPQQQILLTIKSTKITGQQPLQYTNSVGSIYHRMSSKPS 220
Query: 503 ATFWFG 520
+ + G
Sbjct: 221 SRLFVG 226
>SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 30.7 bits (66), Expect = 0.99
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 249 PKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPC-RSRRECHR 425
P S C+R+ +E + R+PR HRP+ + + P + S + R P R R+ H+
Sbjct: 127 PWSSNKDCDRERNSVKEISTTRRPRKSTHRPK--KPTRRPRKNSPRTRKPTRRPRKNTHK 184
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 511 LVWLINNAGGNW-NQVHLIGFSLGAHVVGNAG 603
LV +N GN + +IGFSLG HV G AG
Sbjct: 4 LVKFLNKQTGNTPSSFTVIGFSLGGHVAGYAG 35
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 29.9 bits (64), Expect = 1.7
Identities = 29/101 (28%), Positives = 45/101 (44%)
Frame = +2
Query: 179 PSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTM 358
P T+ + A P++ SP + TI AT+TP + TT+P P TT
Sbjct: 16 PPTIPFLAA-TTPLLMVTTSPLTSPTIPFL---ATTTPLLMVTTSPLPSPTIPFLATTTP 71
Query: 359 ATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLAS 481
T + PP++PF + LL T + + +P LA+
Sbjct: 72 LLMVTTSTLPPPTIPFLATTTPLLMVTTSPLPSPTIPFLAT 112
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/101 (29%), Positives = 43/101 (42%)
Frame = +2
Query: 179 PSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTM 358
P T+ + A P++ SP TI AT+TP + TT+P P TT
Sbjct: 170 PPTIPFLAT-TTPLLMVTTSPLPPPTIPFL---ATTTPLLMVTTSPLPPPTIPFLATTTS 225
Query: 359 ATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLAS 481
T PP++PF + LL T + T +P LA+
Sbjct: 226 LLMVTTSPLPPPTIPFLATTAPLLMVTTSPLPTPTIPFLAT 266
Score = 29.1 bits (62), Expect = 3.0
Identities = 33/99 (33%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +2
Query: 179 PSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTM 358
PS + AP++ SP TI AT+TP + TT+P P TT
Sbjct: 125 PSPTIPFLATTAPLLMVTTSPLPPPTIPFL---ATTTPLLMVTTSPLPPPTIPFLATTTP 181
Query: 359 ATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTI-LPP 472
T PP++PF L T T LL+ TT LPP
Sbjct: 182 LLMVTTSPLPPPTIPF------LATTTPLLMVTTSPLPP 214
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 200 APEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TL 379
APEA + T P T + + + T TP T+P + +S+ G + TP+ T
Sbjct: 3089 APEATVVPKTTVGPSTTIS-PKTETSITETP----ETSPATISISTEKTGKAITTPQGTT 3143
Query: 380 SSDPPS 397
+ PPS
Sbjct: 3144 TELPPS 3149
Score = 28.7 bits (61), Expect = 4.0
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Frame = +2
Query: 200 APEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TL 379
APE+ T SP+ T L T+ T V ++ T+A P T+
Sbjct: 1805 APESTVSPETTVSPETTAVPETTLSPGTTVAQDTTAAPETTVAPETTVSPETIAEPETTV 1864
Query: 380 SSDPPSLPFKT*M--SSLLTGTDLLIQTTILP--PLASRMSVAPSAT 508
+ + + P T S++ + L +TT P LA +VAP T
Sbjct: 1865 APETTTAPVTTLPPDSTMAPKSTLAPETTAAPDTTLAPETTVAPDTT 1911
>SB_33587| Best HMM Match : SAMP (HMM E-Value=2.7)
Length = 488
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 617 PPAWRPALPTT*APKLKPIRCTWFQLPPALLMSQTKKLPRARPTSGT 477
PPA++P L + PK+ IR PP L+ + +PR TS T
Sbjct: 437 PPAYKPQLKES--PKVNRIRDAHLLRPPPPLVRVAEDVPRNTDTSPT 481
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.1 bits (62), Expect = 3.0
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +2
Query: 200 APEAAPIISTGFSPDRT---KTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR 370
APE T P T KT A TA G T T VP+++S GTT+A
Sbjct: 2399 APETTSPTETTAVPGTTAAPKTTASPETTAKPDTTGAAET--TAVPVTTSVPGTTVAAET 2456
Query: 371 *TLSSDPPSLPFKT*M--SSLLTGTDLLIQTTI 463
T+ D ++P T ++ +TGT L +TT+
Sbjct: 2457 -TVVRDTTAVPGTTAALEATAVTGTSTLPKTTV 2488
>SB_17550| Best HMM Match : WW (HMM E-Value=0.0012)
Length = 677
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 288 LREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQI--RLPCRSRRECH 422
++E + P + +Y H+ W+HP + SH+I + C R CH
Sbjct: 19 MKESSSRPGR-KYFFHKMSGMTSWKHPLDLSHKIPAEISCSKTRACH 64
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 4.0
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +2
Query: 167 TCMNPSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSST- 343
T + P T APE T +P+ T +AR + TA T TTAP E S T
Sbjct: 1015 TTVEPETT--LAPETTAAPETTLAPETT--VAREITTAPVTTSVSETTAPPETTASPETT 1070
Query: 344 -DGTTMATPR*TLSSDPPSLPFKT 412
+ T P T++ + + P T
Sbjct: 1071 VEPETTVAPETTVTPEATAAPDTT 1094
Score = 28.7 bits (61), Expect = 4.0
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Frame = +2
Query: 200 APEAAPIISTGFSPDRTKTIARCL*TATS-TP*GIHTTAPTEVPLSSSTDGTTMATPR*T 376
AP++ T +P T T + T+ P T VP +++ TT++ T
Sbjct: 3002 APDSTAAPETTVAPGTTVTPQSTVAPETTIAPETTDEPETTVVPETTAVPETTVSQET-T 3060
Query: 377 LSSDPPSLPFKT*M--SSLLTGTDLLIQTTILPPLASRMSVAPSATFWFGSSTMLEA 541
++ + +LP T ++++ T + +TT++ +A +VAP TF G++ E+
Sbjct: 3061 VAPETTALPESTVAPETTVVPETTAVPETTVMTTVAPDSTVAPVTTFAPGTTVTPES 3117
Score = 27.9 bits (59), Expect = 7.0
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +2
Query: 317 TEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*M--SSLLTGTDLLIQTTILPP------ 472
T+ P ++ D T A P T+S + P T + S++ GT ++ +TT +P
Sbjct: 3548 TDEP-ETTVDPETTAVPETTVSQETTMAPETTALPESTVAPGTTVVPETTAVPETTVVTT 3606
Query: 473 LASRMSVAPSATFWFGSSTMLEA 541
+A +VAP TF G++ E+
Sbjct: 3607 VAPDSTVAPETTFAPGTTVAPES 3629
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 28.3 bits (60), Expect = 5.3
Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Frame = +2
Query: 224 STGFSPDRTKTIARCL*-TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSL 400
S+ S KT C T T TP I PT +++ + TT T ++ P+L
Sbjct: 51 SSSSSSSNKKTTPLCPPITLTQTPTSISNVTPTPTNINNISSTTTPLDSSAT-TTTTPTL 109
Query: 401 PFKT*MSSLLTG-TDLLIQTTILPPLASRMSVAPSATFWFGSSTMLEAIGTK 553
P T T T ++ TT+ + MS S +S M +G K
Sbjct: 110 PIVTLRPPPSTSVTQIVTMTTVTISTTTAMSTFASYASVATTSIMPPTVGWK 161
>SB_40905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 28.3 bits (60), Expect = 5.3
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = -2
Query: 265 PGDCFGSVW*K-ASTDYWRRFWSPVIHSRWVHAG---PLAAEHLHHQASRCNGFLPLH-S 101
PGD FGS W + S DY+ SP + +R H G P A L +R FL + S
Sbjct: 85 PGDRFGS-WDRFESRDYFESCTSPRVTNRQTHGGVVRPSDAYWLKPYLNRPKSFLWVSVS 143
Query: 100 DYCLRES 80
DY LR++
Sbjct: 144 DY-LRDA 149
>SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2085
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 205 WSPVIHSRWVHAGPLAAEHLHHQASRCNGFLP 110
W V+ RWV A P+ ++ +R GF P
Sbjct: 1845 WPKVLKPRWVTALPIVISDINATKTRMTGFAP 1876
>SB_35417| Best HMM Match : DTHCT (HMM E-Value=1.7)
Length = 357
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 276 RQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEP 377
++HQL+ + QP+ R H+P+ +Q H +P
Sbjct: 317 KRHQLQLQQPRSHQPQPRSHQPQPQQPRSHQPQP 350
>SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 EPKQSPGACERQHQLREEFTLPRQPRYRCHR--PRMEQQWQHPDEPSHQIRLPCRSRREC 419
+ +Q P ++Q Q R + +QPR + + PR++QQ Q P Q + P +++
Sbjct: 88 QQQQQPRLKQQQQQPRLKQQQQQQPRLKQQQQQPRLQQQQQQPRLKQQQQQQPRLKQQQQ 147
Query: 420 H 422
H
Sbjct: 148 H 148
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 246 EPKQSPGACERQHQ--LREEFTLPRQPRYRCHRPRMEQQWQHPD 371
+ +Q P ++Q Q L+++ PR + + +PR++QQ QH D
Sbjct: 107 QQQQQPRLKQQQQQPRLQQQQQQPRLKQQQQQQPRLKQQQQHHD 150
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 511 LVWLINNAGGNWNQVHLIGFSLGAHVVG 594
L+ ++ G N + HL G S+G H+VG
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVG 147
>SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 210 RRQ*SVLAFHQTEPKQSPGACERQHQLREEFTLPRQ 317
RR S +FH++E K G + +H+L FTLP Q
Sbjct: 343 RRSYSHSSFHRSECKPRRGHIQVKHKLGCVFTLPSQ 378
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 308 TAPTEVPLSSSTDGTTMATPR 370
T PT VP + ST TT TPR
Sbjct: 138 TTPTTVPTTLSTTATTATTPR 158
>SB_25282| Best HMM Match : rve (HMM E-Value=6.3e-12)
Length = 451
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -2
Query: 220 YWRRFWSPVIHSRWVHAGPLAAEHLHHQASRCNGFLP 110
YW+ S + WV A P+ ++ +R GF P
Sbjct: 388 YWKELASGETNREWVTALPIVISDINASKTRMTGFAP 424
>SB_8054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.9 bits (59), Expect = 7.0
Identities = 27/88 (30%), Positives = 38/88 (43%)
Frame = +2
Query: 200 APEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TL 379
A E P +T S T T + T+ ST TTA T+ S++T TT T L
Sbjct: 236 AAETTPTTTTSASTT-TATTTKATTTSVST-----TTATTKEEESTTTAETTTVTATKPL 289
Query: 380 SSDPPSLPFKT*MSSLLTGTDLLIQTTI 463
SS+ S T + T+ +QT +
Sbjct: 290 SSEETSTMLPTTAPTPKPDTECQVQTML 317
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 373 NPLIRSAFLAVQDVNVIVVDWHRLANSN 456
NPL S L ++N I V+W + + N
Sbjct: 657 NPLAESGLLTANEMNTIFVNWKEIIHCN 684
>SB_52214| Best HMM Match : Alpha_E3_glycop (HMM E-Value=5.1)
Length = 320
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 88 GDNSHYVEGESRYIWMPDGEGVPQLVDLHEPIDYE 192
G+N + GESRYI G+G+ H+P DY+
Sbjct: 250 GENK--LNGESRYIHGTKGKGMFTFYGGHDPEDYQ 282
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/91 (26%), Positives = 37/91 (40%)
Frame = +2
Query: 167 TCMNPSTMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTD 346
T PST A + S RT + +TSTP TT T P +S+T
Sbjct: 62 TTRAPSTSTPRAGSTTTTSAPSTSTPRTGSTTTTSAPSTSTPRTGSTTT-TSAPSTSTTS 120
Query: 347 GTTMATPR*TLSSDPPSLPFKT*MSSLLTGT 439
+T P + ++ +T +S++T T
Sbjct: 121 NSTTRAPSTSTPRTGSTITLRTSTTSVMTTT 151
>SB_12466| Best HMM Match : Transferrin (HMM E-Value=4.4e-21)
Length = 291
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 46 LVTLCSGVAIPTIPGDNS-HYVEGESRYIWMPDGEG 150
L +LC + PT PGD S Y Y+ + +G G
Sbjct: 195 LPSLCGACSNPTCPGDESERYYGYNGSYVCLVEGRG 230
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 249 PKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRS 407
P+Q P + Q ++ LP Q + RP EQQ Q P P Q + P RS
Sbjct: 472 PEQQPQLPFQPGQSPQQPFLPDQQSQKPFRP--EQQPQQPFRPGQQPQQPFRS 522
>SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 809
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 279 QHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHR 425
Q LRE L + RC R E + P++P+H + + C + R C R
Sbjct: 398 QRPLRERHELRKNDCRRCRCCRFEGLPRGPEDPAHVV-VYCGTCRPCIR 445
>SB_38723| Best HMM Match : rve (HMM E-Value=4.7e-13)
Length = 253
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -2
Query: 220 YWRRFWSPVIHSRWVHAGPLAAEHLHHQASRCNGFLP 110
YW+ S + WV A P+ ++ +R GF P
Sbjct: 191 YWKELASGETNREWVTALPIVISDMNATKTRMTGFAP 227
>SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 983
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 279 QHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHR 425
Q LRE L + RC R E + P++P+H + + C + R C R
Sbjct: 572 QRPLRERHELRKNDCRRCRCCRFEGLPRGPEDPAHVV-VYCGTCRPCIR 619
>SB_17748| Best HMM Match : DUF1312 (HMM E-Value=0.0024)
Length = 1272
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Frame = +1
Query: 280 NINSVRNSHYRANRGTVVIVHGWNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRLANSNY 459
N SVRN+ N G V N+G + + +R++ V+ V V+ + NS
Sbjct: 417 NSGSVRNNGSVRNSGGVRYSGSVRNSGVVRNSGSVRNS-RGVRIAGVSVIAGECVRNSGS 475
Query: 460 NTAAAGVPDVGRALGNFLVWL---INNAGGNWNQVHLIGFSLGAHVVGNAGRQAG 615
+ GV + G + V + N+GG N + S+G ++G G G
Sbjct: 476 VRNSGGVRNSGSVRNSGGVRNSGGVRNSGGVRNSGGVSAGSVGVRIIGVDGNSGG 530
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +2
Query: 221 ISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSL 400
+ T K + + TAT + TT P ++ T TM P T ++ PP
Sbjct: 716 VMTSVETRTDKVTSTAMETATVMSTKVVTTCSANCPSATPTTSLTMTPPMLTSTTPPPER 775
Query: 401 P 403
P
Sbjct: 776 P 776
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,601,792
Number of Sequences: 59808
Number of extensions: 470084
Number of successful extensions: 2875
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 2698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2859
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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