Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a08r
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P58146 Cluster: Uncharacterized 15.7 kDa protein in rpl...    36   0.64 
UniRef50_O77393 Cluster: Putative uncharacterized protein MAL3P6...    35   1.9  
UniRef50_Q8IJ33 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_Q7RT07 Cluster: Putative uncharacterized protein PY0019...    33   7.8  

>UniRef50_P58146 Cluster: Uncharacterized 15.7 kDa protein in
           rpl14-rpl12 intergenic region; n=1; Euglena longa|Rep:
           Uncharacterized 15.7 kDa protein in rpl14-rpl12
           intergenic region - Astasia longa (Euglenophycean alga)
          Length = 125

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = -2

Query: 193 LLYIVDYV*VSKLIYRSFPF-AIIILTIDKASFFYALIENIDFFCIFPPFVMYSL-SLFM 20
           ++YI+  + + K++Y+ FP+    IL IDK  FF+ LI++I+F    P  +   +   F 
Sbjct: 42  IIYILKNLTLFKILYKCFPYIKNFILKIDKI-FFHVLIKSINFIKYIPQLIHDKIFEFFW 100

Query: 19  FLTK 8
           F+ K
Sbjct: 101 FILK 104


>UniRef50_O77393 Cluster: Putative uncharacterized protein MAL3P6.2;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL3P6.2 - Plasmodium falciparum
           (isolate 3D7)
          Length = 2423

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 480 IGNIVCSSSHPQDFERNHCNDIHEKNVC 397
           +GN   +S+H  D  +NHCND + KN C
Sbjct: 129 VGNYDNNSNHSDDNNKNHCNDNNNKNHC 156


>UniRef50_Q8IJ33 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1196

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 183  MYNNMSFSKIVNSKKNVYFQNTLKFQSCVYY 275
            +Y NM    ++N KKN+Y  N      C YY
Sbjct: 987  LYRNMKKYSLLNEKKNIYINNQFYLYLCKYY 1017


>UniRef50_Q7RT07 Cluster: Putative uncharacterized protein PY00194;
            n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY00194 - Plasmodium yoelii yoelii
          Length = 1231

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -2

Query: 598  NDDKGRRSC*KKFPRFLFGKMYDIARRLALTLGVSNRDKNREYCLFVITSSGL 440
            N+DKG       FP++ FG  YD    L+  +  S +  N  Y + V T +GL
Sbjct: 975  NNDKGHII--HAFPQYSFGNHYDNRNNLSKIIPTSEKGHNNGYPIIVDTKNGL 1025


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,442,116
Number of Sequences: 1657284
Number of extensions: 12083571
Number of successful extensions: 26265
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26255
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)