Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a08f
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   1.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   8.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.1  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.1  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 42  LEHYNLSALPHRLQWRVPGGRR 107
           L+H    A P    W++P GRR
Sbjct: 333 LKHEQQGAAPDYRHWQIPLGRR 354


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 299  TAPTAIHRNTPTKFITISDKARLCSVVPNKNVTICTS 189
            TA T I    P+K +T+S  A + + + + + T  T+
Sbjct: 1283 TAATTIGEGQPSKKVTVSPSASVPAKIASFDDTFTTT 1319


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 404 EPYIYWTRHFLSYISQRKCNFVIFFFN 484
           E +IY + +    I+ +  NF++ FFN
Sbjct: 48  ENFIYGSMNMTVAITDKIANFMLTFFN 74


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 178 LIYTLVQIVTFLFGTTEHKRALSEIVMNFVGVFLWI 285
           L+Y+  QIVT L  T  +   L E V  F  +F WI
Sbjct: 85  LLYSK-QIVTILKKTKSNIFILKESVDTFNDIFGWI 119


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 341 NWCSPWYPP 315
           ++C PWY P
Sbjct: 32  SYCDPWYNP 40


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 610 SNSFYVLCRH*ILLNSFVKTILVDKETLIVT*VNNGIFAILF 485
           S++ Y+LCR    L S ++ I       ++  +   +F +LF
Sbjct: 227 SDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLF 268


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 172 GYLIYTLVQIVTFLFGTTEHKRALSEIVMNFVGVFLWI 285
           G ++  L  IVTFL    + +   +   +NFV  F  I
Sbjct: 330 GTILGILDAIVTFLIVMIQFEMTQNSTNINFVSTFFKI 367


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 610 SNSFYVLCRH*ILLNSFVKTILVDKETLIVT*VNNGIFAILF 485
           S++ Y+LCR    L S ++ I       ++  +   +F +LF
Sbjct: 227 SDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLF 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,975
Number of Sequences: 336
Number of extensions: 3139
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)