Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a08f
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    26   1.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   1.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.5  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   4.4  

>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 352 FAEKQVGLAVGALCVINGAIYLLDTA 429
           F  K +GLAV A C +    Y+ D A
Sbjct: 258 FGVKDIGLAVTAFCSVGLLFYICDEA 283


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 36  NCLEHYNLSALPHRLQW 86
           N LEH++ S +P  LQW
Sbjct: 592 NKLEHFDYSHIPTHLQW 608


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 376  PGQPVSQRRQTGTGARPGILPSSVMPQRPPQSIG 275
            PG   S+     T A  GI+ S++ P+  P SIG
Sbjct: 2066 PGGGKSKGIIGSTQANIGIVDSNISPKESPDSIG 2099


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
 Frame = +3

Query: 276 PMDCGGRCGITLLGRIPGRAPVPVCLR*ETGWPGRRSSMR-HKWSHIFIGHG 428
           P DCG  C  T    IP  A V V L  E   P        H +++  +G G
Sbjct: 601 PADCGANCMCTHKVDIPLNAIVEVVLVDEVQQPNLSHPFHLHGYAYNVVGIG 652


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,273
Number of Sequences: 2352
Number of extensions: 12995
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)