Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a07r
(376 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0306 + 2499350-2499678,2500041-2500137 31 0.29
01_02_0007 + 10132380-10133201 29 0.90
04_04_1413 - 33386049-33386339 29 1.2
11_06_0156 + 20748472-20748951 29 1.6
05_04_0183 - 18849749-18850225,18850305-18850431,18851762-18853515 29 1.6
04_04_1156 - 31319747-31320085,31320556-31320706,31320795-313210... 29 1.6
02_04_0166 - 20508656-20509092,20509282-20509372 29 1.6
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 1.6
01_01_0082 + 625198-625719 29 1.6
09_04_0130 - 14905044-14905505,14905865-14905933,14906000-149061... 28 2.1
05_02_0164 - 7240739-7243051,7243902-7244036,7244322-7245371 28 2.1
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 28 2.7
02_01_0377 + 2728892-2729187,2729483-2729544,2730516-2730570,273... 28 2.7
01_06_1531 + 38024757-38024790,38025592-38025803,38026111-380262... 28 2.7
08_02_1243 - 25527523-25527960,25527993-25528604 27 3.6
06_03_0543 + 21967787-21970261 27 3.6
03_05_0543 - 25404630-25405408,25405461-25405605 27 3.6
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 27 3.6
08_02_1103 - 24329120-24329623 27 4.8
01_05_0208 - 19291953-19292552,19293027-19293134,19293231-192933... 27 4.8
09_04_0660 - 19286653-19287271,19287791-19287916,19288016-192882... 27 6.3
07_03_0951 - 22836167-22836358,22836455-22837213 27 6.3
06_03_0757 + 24267599-24268882 27 6.3
06_03_0704 + 23706318-23707024,23707093-23707222 27 6.3
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 27 6.3
05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-48... 27 6.3
04_04_1378 + 33105564-33105634,33105786-33106253,33106558-331065... 27 6.3
03_02_0564 - 9477118-9477200,9477617-9477687,9477799-9477944,947... 27 6.3
03_02_0337 + 7594259-7594319,7594455-7595205,7596323-7596509 27 6.3
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 27 6.3
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 26 8.4
11_01_0066 - 536281-537196,537397-537452 26 8.4
07_03_1061 + 23651404-23651625,23651764-23652954 26 8.4
07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948 26 8.4
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 26 8.4
06_03_1471 + 30374988-30375959 26 8.4
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 26 8.4
05_03_0394 - 13440871-13441098,13441197-13441394,13441491-134415... 26 8.4
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 26 8.4
02_02_0327 - 8983983-8985878 26 8.4
>01_01_0306 + 2499350-2499678,2500041-2500137
Length = 141
Score = 31.1 bits (67), Expect = 0.29
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 46 TLAKPAGWPLWQP*ADPNDVIPI 114
TL + WP+WQP D N ++P+
Sbjct: 119 TLGELMDWPIWQPSQDLNSILPV 141
>01_02_0007 + 10132380-10133201
Length = 273
Score = 29.5 bits (63), Expect = 0.90
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 70 PLWQP*ADPNDVIPI---S*RLPPLPMVRGPPESPLQVLRPLEPST---QRVEAMITLFP 231
PL QP DPN+ P+ PP P+ + P SP Q L +P+T Q++ A I+ P
Sbjct: 187 PLPQP--DPNNPQPLPQPDPNAPPQPLPQPDPNSPPQPLPQPDPNTPPGQQINAKISSQP 244
Query: 232 N 234
+
Sbjct: 245 D 245
>04_04_1413 - 33386049-33386339
Length = 96
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -3
Query: 200 CVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAG 57
C DGS GR +G GG G GG G G GC G +G
Sbjct: 50 CADGSGGRRRRTGGGGG----GGGGGGGCGGGGGGGGGGGCGGGGGSG 93
>11_06_0156 + 20748472-20748951
Length = 159
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 293 CWLPKQHRRSFRSRQPRPKY 352
CWLP+ RRS R R R K+
Sbjct: 6 CWLPRACRRSMRHRSCRTKF 25
>05_04_0183 - 18849749-18850225,18850305-18850431,18851762-18853515
Length = 785
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 146 LTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSW 27
+ +G GG ++ TS A G R HP FA+ F SW
Sbjct: 13 VAVGGGGGQKTP--TSPRGAPGADRRHPRPFAKNLDFASW 50
>04_04_1156 -
31319747-31320085,31320556-31320706,31320795-31321026,
31321121-31321331,31321646-31321764,31321835-31322032,
31322163-31322364,31322456-31322832,31322937-31323007,
31326264-31326329,31326414-31326479,31326761-31326835,
31326944-31327018,31327115-31327186,31327683-31327904,
31328012-31328083,31328425-31328496,31329410-31329481,
31329716-31329896,31332132-31332237
Length = 992
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -3
Query: 224 NVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPA-GFAR 48
N + ST C GS ++ + + GGPLT GS R + G A G P G +
Sbjct: 369 NCLQRSTPCFLGSPKTASFAVNCGGPLTSGSDNLRYQSDEVNLGDASYYITGEPTWGVST 428
Query: 47 VTSF 36
V F
Sbjct: 429 VGRF 432
>02_04_0166 - 20508656-20509092,20509282-20509372
Length = 175
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 197 VDGSNGRSTCSGDSGGPLTIGSGGSR-QLIGITSFGSAQGCQRGHPA 60
V GS+ R + G SGG G GG+R Q+ + + G+A RG+ A
Sbjct: 31 VRGSHARRSKRGISGGAGCGGGGGARGQVTAVGASGAAAEDARGYDA 77
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 70 PLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRP 183
P + P A P + + + PP+P + PP P Q P
Sbjct: 322 PYYAPPAQPTETMHQQYQAPPVPQPQAPPAPPQQYQTP 359
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +1
Query: 49 LAKPAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEPST 198
L P G P DV+P PP P V PP SP V P P+T
Sbjct: 40 LPSPCGTTCTYASPPPPDVLPTPVYYPPPPPVYYPPPSPPPVAYP-PPTT 88
>09_04_0130 -
14905044-14905505,14905865-14905933,14906000-14906104,
14906625-14906690,14907080-14907268,14907353-14907439,
14907597-14908118
Length = 499
Score = 28.3 bits (60), Expect = 2.1
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
Frame = -3
Query: 203 LCVDGSNGRSTCSGDSGG-------PLTIGSGGS----RQLIGITSFGSAQGCQRG--HP 63
+ + G GRS G GG PLT+GSGGS + L+ + SA G G +
Sbjct: 125 MMLQGLGGRSPAGGGGGGGDGGLLLPLTLGSGGSGGDVQALLKAAAANSAGGGDAGGVYG 184
Query: 62 AGFA 51
GFA
Sbjct: 185 GGFA 188
>05_02_0164 - 7240739-7243051,7243902-7244036,7244322-7245371
Length = 1165
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -3
Query: 149 PLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSW 27
PL+ G+ GSR L+ + G A+G + H ++ F+ W
Sbjct: 304 PLSSGASGSRVLLTTRNEGVARGMRAQHLHPVEKLDRFDGW 344
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 31 ELKDVTLAKPAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESP 165
E D L + PL + DP DV+ + PP P GPP+ P
Sbjct: 143 ECVDTWLDAHSTCPLCRSRVDPEDVLLLP--EPPKPSTTGPPDPP 185
>02_01_0377 +
2728892-2729187,2729483-2729544,2730516-2730570,
2730784-2730858,2730980-2731054,2731155-2731202,
2731548-2732357,2732450-2732498,2733157-2733266,
2733381-2733488,2733920-2733980
Length = 582
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 94 PNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEP 192
P +IP+ P P V PPE +Q++RP+ P
Sbjct: 517 PPVLIPVPGAGPLGPFVPAPPEVVMQMMRPVMP 549
>01_06_1531 +
38024757-38024790,38025592-38025803,38026111-38026248,
38026405-38026449,38026499-38026591,38028072-38028815
Length = 421
Score = 27.9 bits (59), Expect = 2.7
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = +1
Query: 109 PIS*RLPPLPMVRGPP---ESPLQVLR-PLEPSTQRVEAMITLFPNVRAQTALVMTWRLT 276
P+ +L P+P+ + P S + VL P +P +++ I A M WRL
Sbjct: 96 PVMPKLNPVPLPKQPQFVHHSDMHVLHTPADPMHYQLDPCI-------ATEGSAMVWRLC 148
Query: 277 WRFCWLLAPEAAS 315
+ CW + EA +
Sbjct: 149 FECCWPWSSEATN 161
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 334 PASEGPPMLLREPTTNKNAK*ASRSLPTPSAPA 236
P+S G P + P T A SR P+PS A
Sbjct: 90 PSSRGAPTMCSSPPTQSAAPPGSRCSPSPSPTA 122
>06_03_0543 + 21967787-21970261
Length = 824
Score = 27.5 bits (58), Expect = 3.6
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = -3
Query: 251 AVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLT---IGSGGSRQLIGITS-FGSAQ 84
+V +R + N++ C DG + G L GSGGS+ L+G T F A
Sbjct: 559 SVISRIYHTNLVRVWGFCSDGPHRILVSEFVENGSLDKILFGSGGSQNLLGWTQRFNIAL 618
Query: 83 GCQRG 69
G +G
Sbjct: 619 GVAKG 623
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 27.5 bits (58), Expect = 3.6
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = +1
Query: 31 ELKDVTLAKPAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEPSTQR 204
E +TL K PL P P+ V P + PP P R PP +PL +R PS R
Sbjct: 103 EALTITLPKKTPSPL-TPSPTPSPVTPPP-QQPPQPEPRRPPAAPLPGVR-TPPSPPR 157
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +1
Query: 58 PAGWPLWQP*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRP 183
PA P Q A P IP+ PP V+ PP P+QV P
Sbjct: 65 PAPSPQQQRVASPPPTIPVKFS-PPAAPVKVPPPPPVQVPPP 105
>08_02_1103 - 24329120-24329623
Length = 167
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -2
Query: 321 DLRCCFGSQQPTKTPSEPP-GHYQRRLRPHVWKQCDHCLHPLC 196
D R C +P + P GH R W DH PLC
Sbjct: 99 DCRVCLARFEPESVVNRLPCGHLFHRACLEKWLDYDHATCPLC 141
>01_05_0208 -
19291953-19292552,19293027-19293134,19293231-19293344,
19293464-19293573,19293720-19293808,19293942-19294138,
19294241-19294402,19294501-19294619,19294739-19294826,
19294911-19295016,19295157-19295245,19295351-19295503,
19295631-19295723,19295823-19295889,19296217-19296329,
19296453-19296548,19297963-19298139
Length = 826
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 182 GRSTCSGDSGGPLTIGSGGSRQL--IGITSFGSAQGCQRGHPAGFARVTSFNSWIRA 18
G SG++G +T+ GG + + + SFG +G G+ G ++ ++ A
Sbjct: 739 GAVCTSGEAGDAVTLSCGGGHAVSSVDVASFGVGRGRCGGYEGGCESKAAYEAFTAA 795
>09_04_0660 -
19286653-19287271,19287791-19287916,19288016-19288221,
19288417-19288549,19288632-19288713,19288906-19289035,
19289187-19289279,19289391-19289510,19289594-19289660,
19290079-19290137,19290719-19290943
Length = 619
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 179 RSTCSGDSGGPL--TIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFN 33
RS SG GG + +G GGS L T+ R GF ++T+FN
Sbjct: 525 RSRYSGAVGGTIHAVVGGGGSH-LSNFTAEAPPWSVYREMDYGFVKLTAFN 574
>07_03_0951 - 22836167-22836358,22836455-22837213
Length = 316
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 300 SQQPTKTPSEPPGHYQRRLR 241
S PT TPS+P Y RR R
Sbjct: 63 SPPPTPTPSQPSSSYHRRRR 82
>06_03_0757 + 24267599-24268882
Length = 427
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -3
Query: 191 GSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWI 24
G+ GR +G G + G GG+RQ S G G G GF+ S W+
Sbjct: 293 GNGGRGGGNGGGNGGGSGGGGGTRQAF---SGGGGSGVSSG-GGGFSAGGSSTGWV 344
>06_03_0704 + 23706318-23707024,23707093-23707222
Length = 278
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 191 GSNGRSTCSGDSGGPLTIGSGGSR 120
G GR C+G GG G GG R
Sbjct: 126 GGGGRKVCNGGGGGSGGKGDGGRR 149
>05_05_0136 -
22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 194 DGSNGRSTCSGDSGG-PLTIGSGG--SRQLIGITSFGSAQG 81
DG G S+C D GG P G GG R + + + G+ +G
Sbjct: 85 DGDGG-SSCESDGGGSPRRCGGGGRFQRMVAAVAADGAEEG 124
>05_01_0072 -
486211-486254,486350-486524,486658-486852,487489-487599,
487693-487905,488432-488539,488621-488762,489157-490418,
490460-490480,490842-491228
Length = 885
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -2
Query: 339 GCRLRKDLRCCFGSQQPTKTPSEPPGHYQRRLRP----HVWKQCDHCL 208
GCR+ + G Q TK +E GH R +R HV ++C C+
Sbjct: 634 GCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVRDQNGNHVIQKCIECI 681
>04_04_1378 +
33105564-33105634,33105786-33106253,33106558-33106583,
33106741-33106771,33106890-33106977,33107094-33107338,
33107339-33107383,33107530-33107621,33107718-33107920,
33108215-33108496
Length = 516
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 195 NTEGGGNDHIVSKRAGADGVGNDLEAHLAF 284
N +GGG+D I G G G+D +AF
Sbjct: 381 NVDGGGDDEITG--GGGGGAGSDQRVPMAF 408
>03_02_0564 -
9477118-9477200,9477617-9477687,9477799-9477944,
9478051-9478128,9478284-9478388,9478647-9478769,
9479085-9479171,9479272-9479352,9479443-9479512,
9479604-9479662,9479763-9479831,9479912-9479962,
9480063-9480107,9480203-9480276,9480544-9480667,
9480773-9480940
Length = 477
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 299 LPKQHRRSFRSRQPRP 346
LP HR SFR+ PRP
Sbjct: 15 LPHHHRSSFRTSSPRP 30
>03_02_0337 + 7594259-7594319,7594455-7595205,7596323-7596509
Length = 332
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 212 ASTLCVDGSNGRSTC-SGDSG-GPLTIGSGGS 123
A TLC + + G+ TC +GD G G + GG+
Sbjct: 77 ARTLCAEDATGKFTCATGDCGSGGIQCNGGGA 108
>01_03_0205 +
13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 26.6 bits (56), Expect = 6.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 126 KPSTDRYHIVRISSRLPERPP 64
+P +HI+ I S +P RPP
Sbjct: 340 QPEISSFHIIAIDSGVPRRPP 360
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 26.2 bits (55), Expect = 8.4
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -3
Query: 188 SNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGF 54
+ G + G GGP G GG R G G +G G P GF
Sbjct: 3 NGGGNPRGGGGGGPRGFGGGGPRGFGG----GGPRGFGGGGPRGF 43
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 334 PASEGPPMLLREPTTNKNAK*ASRSLPTPSAPARLETM*SLPPP 203
PAS PP + P + + S + P P +P T S PP
Sbjct: 212 PASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTPP 255
>07_03_1061 + 23651404-23651625,23651764-23652954
Length = 470
Score = 26.2 bits (55), Expect = 8.4
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -3
Query: 233 FGNNVIIASTLCVDGSNGRSTCSGDS---GGPLTIGSG-GSRQLIGITSFGSAQGCQRGH 66
+ NN S+ G+ G+ + D GGP T G G G+ +G+ + G G G
Sbjct: 322 YPNNPTNMSSFAPSGTGGQMGITSDGINWGGP-TPGHGMGNISSLGLANLGRGAGDSFGL 380
Query: 65 PAG 57
P+G
Sbjct: 381 PSG 383
>07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948
Length = 712
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 244 QTALVMTWRLTWRFCWL 294
QT LV+ W +T CWL
Sbjct: 136 QTVLVLWWTITLSVCWL 152
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -3
Query: 212 ASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSF 36
AS VDG+NG T + + G +G T G Q ++G GF + +F
Sbjct: 356 ASLTKVDGNNGADTAEAGISRAEPVPTNGKDLAMGSTDNGQPQRVRKGR--GFTQQYAF 412
>06_03_1471 + 30374988-30375959
Length = 323
Score = 26.2 bits (55), Expect = 8.4
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -3
Query: 254 NAVCARTFGNNVIIASTLCVDGSNGRSTCSGD--SGGPLTIGSGGSRQLIGITS 99
N +C +G ST GS +S CSG GGP GG + I S
Sbjct: 34 NCLCCSQYG---WCGSTSAYCGSGCQSQCSGSCGGGGPTPPSGGGGSGVASIVS 84
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 100 DVIPIS*RLPPLPMVRGPPESPLQVLRPLEP 192
+ PIS + PP P+ PP P+QV P P
Sbjct: 2 EATPISVK-PPSPVAAAPPPPPVQVPVPPPP 31
>05_03_0394 -
13440871-13441098,13441197-13441394,13441491-13441594,
13441687-13442551,13442677-13443045,13443372-13443533,
13443838-13444056,13444138-13444656,13444742-13444819,
13446041-13446163
Length = 954
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 126 KPSTDRYHIVRISSRLPERPPCRLRQSH 43
+P ++Y I RI RPPC L++ +
Sbjct: 80 RPQAEKYGICRIVPPSSWRPPCSLKEKN 107
>03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +1
Query: 136 PMVRGPPESPLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLTWRFCW 291
P R P S ++ S + + +++T N + +L T W FCW
Sbjct: 1449 PSQRRLPTSTTSLVLQAIWSMRSISSIVTWCNNYCSDISLCSTLTFFWEFCW 1500
>02_02_0327 - 8983983-8985878
Length = 631
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = -3
Query: 200 CVDGSNGRST-CSGDSGGPLTIGSGGSRQLIGITSFGSAQG----CQRGH 66
C + GR+ C G GG SG + G T+F A G C GH
Sbjct: 449 CTKSARGRTDRCVGHGGGKRCQSSGCDKSAQGSTNFCKAHGGGKRCLWGH 498
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,243,474
Number of Sequences: 37544
Number of extensions: 250146
Number of successful extensions: 1353
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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