Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a07f
(422 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 59 2e-09
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 58 3e-09
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 56 2e-08
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 55 2e-08
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 4e-08
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 54 5e-08
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 54 5e-08
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 53 1e-07
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 53 1e-07
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 52 1e-07
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 49 1e-06
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 48 2e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 48 4e-06
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 46 1e-05
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 46 1e-05
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 44 5e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 44 5e-05
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 44 7e-05
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 44 7e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 44 7e-05
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 43 1e-04
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 42 2e-04
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 40 6e-04
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 6e-04
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 40 8e-04
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.001
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.001
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 39 0.001
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.008
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.014
SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11) 36 0.014
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 33 0.074
SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.098
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.69
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 28 3.7
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 28 3.7
SB_11981| Best HMM Match : CH (HMM E-Value=0.00075) 28 3.7
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_29930| Best HMM Match : Collagen (HMM E-Value=0.067) 27 4.8
SB_22793| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014) 27 6.4
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 27 8.5
SB_22520| Best HMM Match : F5_F8_type_C (HMM E-Value=0.022) 27 8.5
SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_44966| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07) 27 8.5
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 27 8.5
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 58.8 bits (136), Expect = 2e-09
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPLTIGSGGSRQLIG 269
+Q + +++ C R +G + S +CV + N S+C GDSGGPL G L G
Sbjct: 465 QQAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSCQGDSGGPLVCEEEGRWVLHG 524
Query: 270 ITSFGSAQGCQRGHPAGFARVTSFNSWIRARI 365
TSFG + C H + + RV S+ WI RI
Sbjct: 525 ATSFG--KSCSPKHYSVYTRVNSYMKWIFDRI 554
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 60 SDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRST-CSGDSGGPL 233
S +G + + +Q L + ++ C + V + LC + +G S C+GDSGGPL
Sbjct: 212 STIGTGNSPRILQQAMLPIASHNDCKNKY-YGVSSTAHLCAGEARSGASGGCNGDSGGPL 270
Query: 234 TIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWIR 356
G L G S+G C + FARV S+ WI+
Sbjct: 271 VCEDNGRWYLHGAVSYGKLH-CPTTYYTVFARVASYTDWIK 310
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGIT 275
+Q V+ + CA +T+ G +G S CSGDSGGPL GG+ L G
Sbjct: 457 QQARTPVVDHETCAIKLDKFAADKTTMICAGGSGSSACSGDSGGPLVCHEGGTWVLRGAV 516
Query: 276 SFGSAQGCQRGHPAGFARVTSFNSWI 353
S+G++ C +AR++S WI
Sbjct: 517 SWGTSHSCPGRMFVAYARISSHIDWI 542
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 55.6 bits (128), Expect = 2e-08
Identities = 34/101 (33%), Positives = 54/101 (53%)
Frame = +3
Query: 57 TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLT 236
+SD + A+ Q+ +V L + C T G V S +C G+ G S C+GDSGGPL
Sbjct: 422 SSDQHTLADKLQQSKVPL--VNYTTCRSTNGATVDENSMICAGGA-GSSACNGDSGGPLQ 478
Query: 237 IGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWIRA 359
L G+ S+ +A+ C + +ARV+S+++WI +
Sbjct: 479 CLENERWVLRGVASWVTAETCPGNTFSVYARVSSYSNWIES 519
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 55.6 bits (128), Expect = 2e-08
Identities = 29/90 (32%), Positives = 45/90 (50%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGIT 275
RQ + ++ + C R + T+ G G S C+GDSGGPL GG L G+
Sbjct: 83 RQSLVPLVDHVTCKRGLKEFYLDEETMMCVGGAGSSACNGDSGGPLVCEEGGKWVLRGVA 142
Query: 276 SFGSAQGCQRGHPAGFARVTSFNSWIRARI 365
S+ + C + + +ARV+S WI+ +I
Sbjct: 143 SWVATSQCPVNNYSVYARVSSDVDWIQDKI 172
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 55.2 bits (127), Expect = 2e-08
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +3
Query: 54 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNG--RSTCSGDSGG 227
R +++ G+N Q + S+ ++ C + N I + + G G + TC GDSGG
Sbjct: 1919 RIGESSPGSNVLQ--EASIPLVDQRACEEQYRNLKPITARMRCAGIYGTPKGTCKGDSGG 1976
Query: 228 PLTIGSGGSRQLIGITSFGSAQGC-QRGHPAGFARVTSFNSWIRARI 365
PL S G L+G+TS+ S GC G+ +A V F WIR +
Sbjct: 1977 PLVCESKGRWVLMGVTSW-SYNGCADSGYAGVYADVVYFKDWIRQTV 2022
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 54.4 bits (125), Expect = 4e-08
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPLTIGSGGSRQLIG 269
+Q L + ++ C R +G+ V + LC S+ C+GDSGGPL GS L G
Sbjct: 579 QQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHG 637
Query: 270 ITSFGSAQGCQRGHPAGFARVTSFNSWIR 356
S+G + C H FARV S+ WI+
Sbjct: 638 AVSYG-LRNCPTTHYTVFARVASYTDWIK 665
Score = 48.4 bits (110), Expect = 2e-06
Identities = 24/56 (42%), Positives = 30/56 (53%)
Frame = +3
Query: 189 SNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWIR 356
S+ C+GDSGGPL GS L G S+G + C H FARV S+ WI+
Sbjct: 277 SDAAGGCNGDSGGPLVCEDNGSWFLHGAVSYG-LRNCPTTHYTVFARVASYTDWIK 331
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 54.0 bits (124), Expect = 5e-08
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIG 269
++ L V +NA C + G + + AS +C G GR C GDSGGPL G L G
Sbjct: 548 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGDSGGPLVCNEAGRWVLRG 606
Query: 270 ITSFGSAQGCQRGHPAGFARVTSFNSWI 353
I S+GS + C F RV ++ WI
Sbjct: 607 IVSWGSRE-CSTEFYTVFTRVINYMPWI 633
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 54.0 bits (124), Expect = 5e-08
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIG 269
++ L V +NA C + G + + AS +C G GR C GDSGGPL G L G
Sbjct: 88 QEAELVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGDSGGPLVCNEAGRWVLRG 146
Query: 270 ITSFGSAQGCQRGHPAGFARVTSFNSWI 353
I S+GS + C F RV ++ WI
Sbjct: 147 IVSWGSRE-CSTEFYTVFTRVINYMPWI 173
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 54.0 bits (124), Expect = 5e-08
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +3
Query: 78 ANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDG--SNGRSTCSGDSGGPLTIGSGG 251
A ++ +Q L + ++ C R +G+ V + LC S+ C+GDSGGPL G
Sbjct: 903 AISRHPQQAMLPIASHENCRRKYGD-VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNG 961
Query: 252 SRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWIR 356
S L G S+G + C H FARV S+ WI+
Sbjct: 962 SWFLHGAVSYG-MKYCPTTHYTVFARVASYTDWIK 995
Score = 44.4 bits (100), Expect = 4e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 207 CSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWIRARI 365
C+GDSGGPL G L G S+G A+ C + F RV+S+ +WI +I
Sbjct: 674 CNGDSGGPLVCEQSGVWVLHGAVSYG-ARWCPTDYYTVFTRVSSYVAWINGKI 725
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCVDGS--NGRSTCSGDSGGPLTIGSGGSRQLIG 269
+Q + + ++ C R +G+ + + LC + N C GDSGGPL G L G
Sbjct: 88 QQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGDSGGPLVCERNGQWTLYG 147
Query: 270 ITSFGSAQGCQRGHPAGFARVTSFNSWIRAR 362
+ SFG A C+ + +V+++ WI R
Sbjct: 148 VVSFG-AGNCEVTSYTVYTKVSNYLDWITKR 177
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 52.8 bits (121), Expect = 1e-07
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +3
Query: 75 GANNQQKRQVSLQVITNAVCARTFGNNVIIA--STLCVDGSNGRSTCSGDSGGPLTIGSG 248
G ++ +Q L V +++ C R V + S +C G G C GDSGGP G
Sbjct: 209 GQPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGM-GMGGCQGDSGGPFVCNEG 267
Query: 249 GSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWI 353
G L G S+G C H FARV+SF WI
Sbjct: 268 GRWVLRGAVSWGQPM-CGTDHYTVFARVSSFIDWI 301
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 52.4 bits (120), Expect = 1e-07
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 69 ASGANNQQKRQVSLQVITNAVCARTFGNNVI-IASTLCVDGSNGRSTCSGDSGGPLTIGS 245
+ GA+ + +Q ++++ A C + ++ST+ G TC GDSGGPL +
Sbjct: 352 SGGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGIDTCQGDSGGPLVCEN 411
Query: 246 GGSRQLIGITSFGSAQGCQR-GHPAGFARVTSFNSWI 353
L+G+TS+G GC +P +A++T W+
Sbjct: 412 NNKWTLVGVTSWG--YGCAHPDYPGIYAKLTELKDWV 446
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG--RSTCSGDSGGPLTIGSGGSRQL 263
++V L ++ ++ C T+ + I C G+ G ++ CSGDSGGPL GG L
Sbjct: 440 QEVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKAVCSGDSGGPLVCERGGRWFL 498
Query: 264 IGITSFGSAQGCQRGHPAGFARVTSFNSWIRAR 362
+G++S+G C + P F+ V + WIR +
Sbjct: 499 MGLSSWGWV--CPQARPKVFSDVLAAMDWIREK 529
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG--RSTCSGDSGGPLTIGSGGSRQL 263
++V L ++ ++ C T+ + I C G+ G ++ CSGDSGGPL GG L
Sbjct: 689 QEVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKAVCSGDSGGPLVCERGGRWFL 747
Query: 264 IGITSFGSAQGCQRGHPAGFARVTSFNSWIRAR 362
+G++S+G C + P F+ V + WIR +
Sbjct: 748 MGLSSWGWV--CPQARPKVFSDVLAAMDWIREK 778
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 102 VSLQVITNAVCARTFGNNVIIAST-LCVDGSNG-RSTCSGDSGGPLTIGSGGSRQLIGIT 275
V + ++++A C + N I T LC G + +C DSGGPL GG +G+
Sbjct: 183 VMVPLVSHATCNKPLSYNGTIHETALCAGYERGLKDSCEFDSGGPLACQKGGRYYAVGLV 242
Query: 276 SFGSAQGCQRGHPAG-FARVTSFNSWIRARI 365
S+G C R H G ++R+ W+ ++I
Sbjct: 243 SWGDE--CARAHKFGVYSRMAKLTPWMVSKI 271
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 49.2 bits (112), Expect = 1e-06
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +3
Query: 69 ASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 242
ASG N K Q S+ +++ + C + N I S LC + G C GDSGGPL
Sbjct: 85 ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDACQGDSGGPLVCE 143
Query: 243 SGGSRQLIGITSFGSAQGCQRGHPAG-FARVTSFNSWIR 356
G + G TS+G GC + G +A V +W++
Sbjct: 144 YNGRWHIEGATSWG--YGCASPNQYGVYAHVRYLKAWVQ 180
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 48.4 bits (110), Expect = 2e-06
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +3
Query: 69 ASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 242
ASG N K Q S+ +++ + C + N I S LC + G C GDSGGPL
Sbjct: 429 ASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLDAGGIDACQGDSGGPLVCE 487
Query: 243 SGGSRQLIGITSFGSAQGCQRGHPAG-FARVTSFNSWIR 356
G + G TS+G GC + G +A V +W++
Sbjct: 488 YKGRWHIEGATSWG--YGCASPNQYGVYAHVRYLKAWVQ 524
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 48.0 bits (109), Expect = 3e-06
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 66 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCSGDSGGPLTIG 242
++ G+ + Q + + T + C R++ I A +C G TC GDSGGPL
Sbjct: 765 SSGGSQPEALNQAVVPLRTRSECERSYPGK-ISADMICAGNPEGGVDTCQGDSGGPLVCQ 823
Query: 243 SGGSRQLIGITSFGSAQGCQ-RGHPAGFARVTSFNSWI 353
G L G+TS+G GC G +A V W+
Sbjct: 824 HGNQWFLTGVTSWG--HGCAFAGKYGVYAGVQQLKQWV 859
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 47.6 bits (108), Expect = 4e-06
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 66 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 242
A+ G +Q S+ V++ A C + + I S LC G TC GDSGGP+
Sbjct: 834 ASGGTAPDILQQASVPVVSRARCEKAYPGK-IHDSMLCAGLDQGGIDTCQGDSGGPMVCE 892
Query: 243 SGGSRQLIGITSFGSAQGC-QRGHPAGFARVTSFNSW 350
S G + G TS+G GC Q G +A V + +W
Sbjct: 893 SRGRFYIHGATSWG--YGCAQPGKFGVYAHVKNLVAW 927
Score = 33.9 bits (74), Expect = 0.056
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +3
Query: 75 GANNQQKRQVSLQVITNAVCARTF---GNNVIIASTLCVDGSNGR--STCSGDSGGP-LT 236
G ++ +Q + ++ C + G + I ++ G G S C GDSGGP +
Sbjct: 194 GGSHHILQQAMMPPLSQDACKKKVQQAGFGIQITDSMVCAGVPGSVVSGCHGDSGGPYVC 253
Query: 237 IGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWI 353
I G L G S+GS + F RV F +WI
Sbjct: 254 IQPDGRYVLQGDVSWGSGRCDSSQMFTVFGRVAHFRNWI 292
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 46.4 bits (105), Expect = 1e-05
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Frame = +3
Query: 75 GANNQQKRQVSLQVITNAVCA-RTFGN-NV--------IIASTLCVD--GSNGRSTCSGD 218
G + +Q L+V++N C+ R G+ N+ + + LC G G++ C+GD
Sbjct: 168 GPTANKLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAGKTGKNGCNGD 227
Query: 219 SGGPLTI-GSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNSWI 353
SGGP + G L G+ S+G + H + FARV+ WI
Sbjct: 228 SGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWI 273
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 46.4 bits (105), Expect = 1e-05
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +3
Query: 66 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 242
++ G+ +QVS+ + + A C ++ N I S +C G C GDSGGP+
Sbjct: 35 SSGGSTPDYLQQVSVPIRSRARCDSSYPNK-IHDSMICAGIDKGGIDACQGDSGGPMVCE 93
Query: 243 SGGSRQLIGITSFGSAQGCQR-GHPAGFARVTSFNSWIR 356
+GG + G TS+G GC G +A+V WI+
Sbjct: 94 NGGRFYIHGATSWG--YGCAAPGLYGVYAKVKYLLPWIK 130
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 46.0 bits (104), Expect = 1e-05
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNN--VIIASTLCV-DGSNGRSTCSGDSGGPLTIGSGGSRQ-- 260
++ + ++ + VC + F + + + C S G+ C GDSGG + ++
Sbjct: 264 KETCMPIVNSHVCNQAFQDEGYSVTPNMFCAGQASGGKDICQGDSGGGFVLYDSAKQKWF 323
Query: 261 LIGITSFGSAQGCQRGHPAG-FARVTSFNSWI 353
L G+ S+GS+ GC + G + RVT F WI
Sbjct: 324 LGGVVSWGSSLGCGLPNKYGVYVRVTQFLGWI 355
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 44.0 bits (99), Expect = 5e-05
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 66 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 242
A G++ QV + +++ + C+R + + S +C S G +C GDSGGP+
Sbjct: 6 AEGGSSPTVLMQVEVPIVSASTCSRAYSR--LHESMVCAGRASGGIDSCQGDSGGPMVCE 63
Query: 243 SGGSRQLIGITSFGSAQGCQR 305
G L G+ S+G GC R
Sbjct: 64 YNGKFNLEGVVSWGI--GCAR 82
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 44.0 bits (99), Expect = 5e-05
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +3
Query: 99 QVSLQVITNAVCARTFGN-NVIIASTL-CVD-GSNGRSTCSGDSGGPLTIGSGGSRQLIG 269
Q ++ +++ C + + + + ++S + C G+ G C GDSGGPL G L+G
Sbjct: 254 QAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGGPLVCKEGDVWYLMG 313
Query: 270 ITSFGSAQGCQRGHPAG-FARVTSFNSWIRARI 365
S+G GC RG G +A + W+++ I
Sbjct: 314 AISWG--VGCARGGRYGVYADMMDLKYWVQSTI 344
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 43.6 bits (98), Expect = 7e-05
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGGPLT--IGSGGSRQLI 266
R + ++ N VC R+ +N T C DG G TC GDSGG G + +
Sbjct: 249 RHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGGSFVREFRREGKYRWV 308
Query: 267 --GITSFGSAQGCQRGHPAGF-ARVTSFNSWI 353
GI S+G +GC + GF RV + WI
Sbjct: 309 SAGIVSWG--EGCGQKDKYGFYTRVEPYVHWI 338
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 43.6 bits (98), Expect = 7e-05
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 66 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIG 242
A+ G +Q S+ +++ + C + + I +S LC G C DSGGPL
Sbjct: 248 ASGGDTPDLLQQASVPIVSRSRCDKAYPGK-IDSSMLCAGLDKGGIDACQRDSGGPLVSK 306
Query: 243 SGGSRQLIGITSFGSAQGCQRGHPAG-FARVTSFNSWI 353
+G + G TS+G GC R G +A V + W+
Sbjct: 307 TGERFYIHGATSWG--YGCARSGKFGVYAHVKNLIGWV 342
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 43.6 bits (98), Expect = 7e-05
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Frame = +3
Query: 75 GANNQQKRQVSLQVITNAVC--ARTFGNNVIIASTLCVDGSNGR-STCSGDSGGPLTIGS 245
G + R+V + ++ +C A ++G VI LC G C DSGGPL
Sbjct: 178 GEQSLALREVQVHMVPRELCNSANSYGG-VIHERALCAGPREGGCGPCQFDSGGPLACSE 236
Query: 246 GGSRQLIGITSFGSAQGCQRGHPAG-FARVTSFNSWIRARI 365
GG + GI S+G GC + G ++ + W+R I
Sbjct: 237 GGLWYMYGIVSYG--VGCGVANKFGVYSNMYELTDWVRDTI 275
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 42.7 bits (96), Expect = 1e-04
Identities = 29/92 (31%), Positives = 42/92 (45%)
Frame = +3
Query: 57 TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLT 236
+SD AN Q+ +VS+ V+ S +C G+ G S C GDSGGPL
Sbjct: 95 SSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAGGA-GSSICHGDSGGPLQ 153
Query: 237 IGSGGSRQLIGITSFGSAQGCQRGHPAGFARV 332
G L G+ S+ + C + + +ARV
Sbjct: 154 CEENGHWVLRGVASWVARMHCPGEYYSVYARV 185
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 42.7 bits (96), Expect = 1e-04
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +3
Query: 75 GANNQQKRQVSLQVITNAVCARTFG-NNVIIASTLCVD-GSNGRSTCSGDSGGPLTIGSG 248
G Q R+ +++++ +C + N I LC G C DSGGPL+ G
Sbjct: 186 GTKPQVIREATVKLVPPEICNQVESYNGSIHVRALCAGFDQGGVDACQFDSGGPLSCSIG 245
Query: 249 GSRQLIGITSFGSAQGCQRGHPAG-FARVTSFNSWIRARI 365
L G+ S+G C R G +A + SW+R I
Sbjct: 246 SRFYLTGVVSWG--HECARPKKYGVYANMMRMTSWVRDTI 283
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 41.9 bits (94), Expect = 2e-04
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +3
Query: 66 AASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTI- 239
++ GA + Q S+ +++ + C I S LC G +C GDSGGPL
Sbjct: 165 SSGGAAPDRLMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGPLVCE 224
Query: 240 GSGGSRQLIGITSFGSAQGCQRGHPAG-FARVTSFNSWI 353
+ G L G+TS+G GC G +A V WI
Sbjct: 225 DTNGRWHLEGVTSWG--YGCAAPRMYGVYASVRYLRDWI 261
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 41.9 bits (94), Expect = 2e-04
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTI-GSGGSRQLIGI 272
+QV L +++ VC N + D R C GDSG P+ + + GS +G+
Sbjct: 876 KQVQLPFVSHRVCQVNHTNAITKRMRCAGDVMGERDACKGDSGSPIVVKRTDGSWSAVGL 935
Query: 273 TSFGSAQGC-QRGHPAGFARVTS--FNSWI 353
+S+G +GC Q+G +A + S ++ WI
Sbjct: 936 SSWG--EGCAQKGKFGVYADLLSAEYDLWI 963
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRST---CSGDSGGPLTI-GSGGSRQL 263
++ + +++ CA ++ S + G ST C GDSGGP GS +
Sbjct: 1475 QEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGGPFVCQGSNKRWNI 1534
Query: 264 IGITSFGSAQGCQRGHP--AGFARVTSFNSWIRARI 365
G+ S+G+ + C G +ARV F WIR I
Sbjct: 1535 QGVVSWGT-RTCSSGQNEYTVYARVAQFVPWIRKYI 1569
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 40.7 bits (91), Expect = 5e-04
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGGPLT--IGSGGSRQLI 266
R + V + +C + + T C +G G TC GDSGG + G + +
Sbjct: 191 RHTAFTVQPDRICRGSTSYHFNATITFCAGEGKGGNDTCRGDSGGSFVREVRREGKYRWV 250
Query: 267 --GITSFGSAQGCQRGHPAGFARVTSFNSWIRARI 365
GI S+G G +G + RV S+ SWI + I
Sbjct: 251 SAGIVSWGEGCGI-KGKYGFYTRVESYLSWINSTI 284
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 40.3 bits (90), Expect = 6e-04
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Frame = +3
Query: 72 SGANNQQKRQVSLQVITNAVCA--RTFGNNVIIASTLCVD-GSNGRSTCSGDSGGP-LTI 239
+G+ ++ Q + +++ C+ +++G+ I + LC G +C GDSGGP +
Sbjct: 359 AGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGMRQGGVDSCQGDSGGPFVCT 417
Query: 240 GSGGSRQ--LIGITSFGSAQGCQRGHPAG-FARVTSFNSWI 353
RQ L+G+TS+G +GC R G +A V + WI
Sbjct: 418 NPENPRQWTLVGVTSWG--KGCARALKYGIYANVRRYLHWI 456
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 40.3 bits (90), Expect = 6e-04
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 195 GRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQ-RGHPAGFARVTSFNSWIRARI 365
G +C GDSGGP+ + G L G+ S+G GC RG +A+V WI + I
Sbjct: 273 GIDSCQGDSGGPMVCENNGRFYLDGVVSWG--HGCAGRGKFGVYAKVRYVKEWIESYI 328
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 39.9 bits (89), Expect = 8e-04
Identities = 30/90 (33%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 SGSNNXXXXXXXXXXXXRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIAS-TLC 179
SGS RT S A Q Q L V ++ C RT G V + S ++
Sbjct: 145 SGSRAQAGARCYITGWGRTVGGGSAAGILQ--QAMLPVAGDSDCQRTNGRLVPVDSRSMI 202
Query: 180 VDGSNGRSTCSGDSGGPLTIGSGGSRQLIG 269
G G+ C GDSGGP GG L G
Sbjct: 203 CAGGQGKGGCQGDSGGPFVCEEGGKWVLRG 232
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 39.9 bits (89), Expect = 8e-04
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +3
Query: 168 STLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAGFAR 329
S +C G C GDSGGP GG L G S+G + C+ + FAR
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVCNEGGKWVLRGAVSWGH-EMCRTDYYTVFAR 187
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +3
Query: 90 QKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-STCSGDSGGPLTIGSG--GSRQ 260
Q R ++ V++ + C + + I +C G+ +C GDSGGP SR
Sbjct: 585 QLRHATIPVLSVSECRANYSGHTINDKVICAGYEGGKIDSCKGDSGGPFVCKDPRVTSRF 644
Query: 261 LI-GITSFGSAQGCQR-GHPAGFARVTSFNSWI 353
++ G S+G GC R G P + + + +WI
Sbjct: 645 ILHGAVSWG--VGCARKGQPGIYTDIKKYLNWI 675
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 99 QVSLQVITNAVC-ARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIGSG-GSRQLIG 269
++ + +++ VC A N I C GR +C GDSGGPL + G L G
Sbjct: 138 ELEVDIVSKEVCNANDSYNGTINDRYFCAGFPQGGRDSCGGDSGGPLVCSNADGQYVLRG 197
Query: 270 ITSFGSAQGCQR 305
+ S+G +GC R
Sbjct: 198 VVSWG--EGCAR 207
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 39.1 bits (87), Expect = 0.001
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +3
Query: 54 RTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCV---DGSNGRSTCSGDSG 224
R A + Q+ + + T + NV S LC D S C GDSG
Sbjct: 249 RNHGDADMSKKLQEAVMPVVAFTECDLRNSHKQNVGWKSMLCAGYNDNKTQTSGCIGDSG 308
Query: 225 GPLTIGSGG--SRQLI-GITSFGSAQGCQRGHPAGFARVTSFNSWI 353
GPL +G S+ ++ G+TS+G + R + F +V++F WI
Sbjct: 309 GPLMCKAGDRWSKWVLHGVTSWGDSTCDGRAAYSVFTKVSNFVQWI 354
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFG-NNVIIASTLCVDGSNGR-STCSGDSGGPLTIGSGGSRQLIG 269
R+ +Q++ C N + LC G C DSGGPL G L G
Sbjct: 132 REAQVQLVPQDKCNSPQSYNGEVSGRALCAGFERGGVDACQYDSGGPLACEERGRWYLTG 191
Query: 270 ITSFGSAQGCQRGHPAG-FARVTSFNSWI 353
+ S+G C H G +A + + N+W+
Sbjct: 192 VVSYG--HECGNPHKYGLYADMATLNTWV 218
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 36.7 bits (81), Expect = 0.008
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Frame = +3
Query: 99 QVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTCSGDSGGPLTIGS-------GG 251
+ ++ ++ C + + ++ A+ C + S+ C GDSGGP ++ + G
Sbjct: 268 EATVPIVDIQTCRKAHPDYIVTANMFCAGFENSSRGDACQGDSGGPFSVDNPLPATPKGQ 327
Query: 252 SRQ-LIGITSFGSAQGCQR-GHPAGFARVTSFNSWI 353
R L+G+ S+G GC + G + R+ +F WI
Sbjct: 328 HRHVLLGVISWG--DGCGKFGKYGVYTRLFNFIDWI 361
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 35.9 bits (79), Expect = 0.014
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 72 SGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSN--GRSTCSGDSGGPLTIGS 245
SG + +Q+ + ++ +VC + II G N G+ C GDSGGPL+ +
Sbjct: 126 SGVFSPTLKQLKVPLVNKSVCNSNNSYSGIIHEQFMCAGYNQGGQDGCLGDSGGPLSCQT 185
Query: 246 -GGSRQLIGITSFG 284
G L G+ S+G
Sbjct: 186 ESGDWVLTGLMSWG 199
>SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11)
Length = 326
Score = 35.9 bits (79), Expect = 0.014
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 174 LCVDGSNG-RSTCSGDSGGP-LTIGSGGSRQLIGITSFGSAQGCQRGHPAGFARVTSFNS 347
LC N S+C GDSGGP + + G L G S+GS + + F RV F +
Sbjct: 2 LCAGVENSILSSCHGDSGGPYVCVQPDGRYVLQGDVSWGSGKCDAKQMFTVFGRVAHFRN 61
Query: 348 WI 353
WI
Sbjct: 62 WI 63
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 33.5 bits (73), Expect = 0.074
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 99 QVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPLTIGSGGSRQLIGIT 275
QV++ +++N C R A T C + C GD G P+ I S + + + +
Sbjct: 301 QVTVPIVSNEECKRASIYTYDSAFTFCAGFRRKPLAPCFGDVGSPMVIQSPRTGRWVIVG 360
Query: 276 SFGSAQGC 299
FG ++GC
Sbjct: 361 LFGWSEGC 368
>SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 33.1 bits (72), Expect = 0.098
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 108 LQVITNAVCARTFGNNVIIASTLCVDGSNGRST--CSGDSGGPLTIGSGGSRQLIG 269
L +++NA C R + + V + LC S+ C+GDSGG L GG L G
Sbjct: 2 LPLVSNAECQRKY-SKVNAKAHLCACSGQAASSGGCNGDSGGALVCEEGGRSILRG 56
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 30.7 bits (66), Expect = 0.52
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSGGPL 233
+Q ++ V+ A C + + I S LC + G C GDSGGP+
Sbjct: 469 QQATVPVVGRARCMKAYRGQ-IHESMLCAGLDAGGVDACQGDSGGPM 514
>SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 30.3 bits (65), Expect = 0.69
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 141 TFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHPAG 320
+ GN++ + + G N S G SGG + I S G+ S G G
Sbjct: 546 SIGNSLHLDGQILNTGGNAESNSGGGSGGSILI-SATLFSGHGVISASGGAGSGTGGGGS 604
Query: 321 FARVTSFNSWIR 356
RV + SW+R
Sbjct: 605 GGRVAAHVSWLR 616
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.9 bits (64), Expect = 0.91
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +3
Query: 96 RQVSLQVITNAVCARTFGNN--VIIASTLCVD--GSNGRSTCSGDSGGPLTIGSGGSRQL 263
+Q + V+++ C R + V + LC G++ S C GDSGGP G R +
Sbjct: 431 QQARIPVVSSEECERVNNKHRKVDKVTMLCAGNGGNSSISGCHGDSGGPFVCMGGDGRWV 490
Query: 264 I 266
+
Sbjct: 491 L 491
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 132 CARTFG-NNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFG 284
C T G + A+ +C DG CS D G PL L+G+ S+G
Sbjct: 202 CNSTAGYKGQVYANMICSDGL----ACSVDGGSPLVANDSNMLMLLGVFSWG 249
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 250 PPLPMVRGPPESPLQVLRPLEPSTQRVEAMIT 155
PPLP PP P+Q RP P+T +A T
Sbjct: 920 PPLP----PPPPPIQTTRPTVPTTPTTQASTT 947
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 132 CARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGS 254
CA T N +A T GS+ +T DS T GSG S
Sbjct: 218 CASTTPNGGYLAITTARSGSSATTTPRSDSSAMTTPGSGSS 258
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 295 P*ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEP 185
P A P+ IP + PP+P PP SP PL P
Sbjct: 191 PPAPPSPPIPTAPPTPPMPETPLPPGSPHIPPAPLHP 227
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Frame = +3
Query: 105 SLQVITNAVCARTFGNNVIIASTLCVDG-------SNGRSTCSGDSGGPLTIGSGGSRQL 263
+++ TN + R N V AST+ + S G CS + +GG ++
Sbjct: 852 AVETTTNEISQRFIPNVVGKASTVAQEALLRKLGSSKGVEACSAVTPCTSPSEAGGCFKV 911
Query: 264 IGITSFGSAQGCQRGHPA 317
I TS A C RG P+
Sbjct: 912 IPSTSLNGAVACSRGPPS 929
>SB_11981| Best HMM Match : CH (HMM E-Value=0.00075)
Length = 823
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -2
Query: 289 ADPNDVIPIS*RLPPLPMVRGPPESPLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTW 110
A P + P R PP PP PL L+ L PS + + F + A+ ++ W
Sbjct: 239 ATPVVIKPSPRRTPPWQEQLLPPRGPLSPLQTLCPSPLSPRSTRSHFAGLAAEDCALLNW 298
>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2
Query: 50 RKDLRC---CFGSQQPTKTPSEPPGHYQRRLRPHVWKQCDHC 166
R++ +C C+G + +P PP RL W+ CD C
Sbjct: 279 RRNHKCNNLCYGCGEQECSPLVPPAEQDHRLE---WQYCDEC 317
>SB_29930| Best HMM Match : Collagen (HMM E-Value=0.067)
Length = 129
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 186 GSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRG 308
G G C G GG +G G +G G GC+ G
Sbjct: 88 GCEGGGGCVGCEGGGGCVGCEGGGGCVGCEGGGGCVGCEGG 128
>SB_22793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 4.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 289 LKVAREATLPASPESHPSTPGSGL 360
L + + +LP PE+HPS P G+
Sbjct: 214 LHLFKNYSLPLQPETHPSNPRQGI 237
>SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014)
Length = 399
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +1
Query: 43 PASEGPPMLLREPTTNKNAK*ASRSLPTPSAPARLET--M*SLPPP 174
PA PP P K ++ SLP P P T M LPPP
Sbjct: 217 PAPAPPPRPCPAPRVRKTIPSSTDSLPRPGRPPSPSTRGMKPLPPP 262
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 27.1 bits (57), Expect = 6.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 180 VDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQ 302
V G +GR+ G +G P G+ G R G+T A+G +
Sbjct: 233 VPGKSGRNGTPGKNGRPGAKGAMGPRGYRGLTGSKGARGAR 273
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 27.1 bits (57), Expect = 6.4
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +3
Query: 183 DGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQG-----CQRG 308
DG G +GD G P G+ GSR G F A+G C RG
Sbjct: 320 DGPEGLPGPAGDDGRPGENGAPGSRGNSGPAGFPGAKGKVVSTCSRG 366
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 183 DGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQGCQRGHP 314
DG+NG+ +G SG P G GG + G+ +G RG P
Sbjct: 525 DGANGQRGVTGPSGSP---GPGGLQGAAGMPGPAGPKG-DRGSP 564
>SB_22520| Best HMM Match : F5_F8_type_C (HMM E-Value=0.022)
Length = 703
Score = 26.6 bits (56), Expect = 8.5
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 138 RTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQLI--GITSFGSAQGCQRGH 311
R + NV + + G+N S +G G L +G G L GI G+ + + H
Sbjct: 236 REYLRNVTASKNMTESGNNTSSNSTGGLGIGLGVGKGALGGLAGGGIPGQGALEFLDKEH 295
Query: 312 PAGF 323
GF
Sbjct: 296 LVGF 299
>SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 26.6 bits (56), Expect = 8.5
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -2
Query: 214 PLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLTWRFCWLLAPEAASE 59
P Q LEP VE ++T V A TA V L R L PE+A+E
Sbjct: 118 PFQSAESLEPLLLMVEQLVTSPRAVDASTASVYLKILVDRCMVPLYPESATE 169
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 43 PASEGPPMLLREPTTNKNAK*ASRSLPTPSAPARLETM*SLPP 171
P + PP +EPTT+ + S S T +APA + PP
Sbjct: 786 PPTTAPPTTTKEPTTDAS---TSTSAATTTAPATTTPPTTAPP 825
>SB_44966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 26.6 bits (56), Expect = 8.5
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = -2
Query: 220 ESPL-QVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLTWRFCWLLAPEAASE 59
E PL ++L P R E I L NVR TA+ L R WL A + E
Sbjct: 328 ERPLCELLGPFVIHGLRPEGQINLHYNVRILTAVSRFCSLYQRKAWLWAKQKCDE 382
>SB_39661| Best HMM Match : KOW (HMM E-Value=1.1e-07)
Length = 487
Score = 26.6 bits (56), Expect = 8.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 316 PASPESHPSTPGSGLE 363
P SP +P TPG+GLE
Sbjct: 352 PVSPAYNPHTPGAGLE 367
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 72 SGANNQQKRQVSLQVITNAVCARTFG-NNVIIASTLCVDGSNGR-STCSGDSGGPL 233
+G + R+ ++++ VC N I + LC G C DSGGPL
Sbjct: 94 NGTQPEALREAKVRLVPTWVCNLVNSYNGTIHSRALCAGFKEGGVDACQYDSGGPL 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,617,750
Number of Sequences: 59808
Number of extensions: 266038
Number of successful extensions: 1064
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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