Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a07f
         (422 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    44   7e-07
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   1.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   2.5  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   3.3  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   3.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.3  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   4.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   5.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   5.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.7  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   7.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   10.0 

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 44.0 bits (99), Expect = 7e-07
 Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = +3

Query: 96  RQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSGGPLTIGSGGSRQL--IG 269
           ++ +L ++T   C + +GN  I+ + +C   + G+  C  DSGGP+   +  +++L  IG
Sbjct: 311 QKTTLNMLTQVECYKYYGN--IMVNAMCAY-AKGKDACQMDSGGPVLWQNPRTKRLVNIG 367

Query: 270 ITSFGSAQGCQRGHPAGFARVTSFNSWI 353
           I S+G+  G    +P G  +V S+  WI
Sbjct: 368 IISWGAECG---KYPNGNTKVGSYIDWI 392


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 141 TFGNNVIIASTL-CVDGSNGRSTCSGDSGGPLTIGSGGSRQLIGITSFGSAQG 296
           T G +V+++    C D   G  + S  +GG +T  SGGS  ++G  + G   G
Sbjct: 2   TKGRHVVMSCCCWCCDNLGGPGSSS--AGGVVTGASGGS-IVVGANNGGGGGG 51


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +2

Query: 254 PSTDRYHIVRISSRL 298
           P+T+ Y+I+ +++RL
Sbjct: 116 PNTEEYYIIEVNARL 130


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 374 RQLNSSPDPGVEGCDSGEAGRVASLATLS*SERC 273
           RQ N +   GV+GCD    GR      ++  ERC
Sbjct: 101 RQCNDT-SIGVDGCDLMCCGRGYKTQEVTVVERC 133


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 374 RQLNSSPDPGVEGCDSGEAGRVASLATLS*SERC 273
           RQ N +   GV+GCD    GR      ++  ERC
Sbjct: 102 RQCNDT-SIGVDGCDLMCCGRGYKTQEVTVVERC 134


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 76  EPTTNKNAK*ASRS 117
           EP TNKN K  SRS
Sbjct: 239 EPGTNKNGKFFSRS 252


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 12/49 (24%), Positives = 18/49 (36%)
 Frame = -2

Query: 268 PIS*RLPPLPMVRGPPESPLQVLRPLEPSTQRVEAMITLFPNVRAQTAL 122
           P+S  +PP P  +  P++      P  P    +       P V   T L
Sbjct: 759 PLSVSIPPPPSAQNVPQNTNSQAIPRIPILPMIPVYCVPVPQVNDSTIL 807


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 44  RLRKDLRCCFGSQQPTKTPSEPPGHYQRRLRP 139
           RLR++     G+ +P   P   P H + R  P
Sbjct: 115 RLRREPEAEPGNNRPVYIPQPRPPHPRLRREP 146


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 96  VFVGCWLP 73
           VFV CWLP
Sbjct: 335 VFVVCWLP 342


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 96  VFVGCWLP 73
           VFV CWLP
Sbjct: 335 VFVVCWLP 342


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 257 STDRYHIVRISSRLPERPPCRLRQSHILQLL 349
           +T R        RLP  PP R+R+   + LL
Sbjct: 624 TTKRDGTQETEERLPPLPPKRIRKMPSMPLL 654


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 96  VFVGCWLP 73
           VFV CWLP
Sbjct: 335 VFVVCWLP 342


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 275 IVRISSRLPERPP 313
           I+R +SR P RPP
Sbjct: 116 IIRRNSRYPLRPP 128



 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 77  SQQPTKTPSEPPGHYQRRLR 136
           S+ P + P E   HY+R  R
Sbjct: 121 SRYPLRPPQEVISHYRRTRR 140


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -3

Query: 93  FVGCWLP 73
           FV CWLP
Sbjct: 315 FVACWLP 321


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 75   PKQHRRSFRSRQPRPKYQQ 19
            P+Q  +  + +QP+P+ QQ
Sbjct: 1517 PQQQSQQPQQQQPQPQQQQ 1535


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 96  VFVGCWLP 73
           VF+ CWLP
Sbjct: 343 VFIICWLP 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,192
Number of Sequences: 438
Number of extensions: 2544
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)