Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a06r
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.             30   6.3  
M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.             30   6.3  
M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.             30   6.3  
BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.      30   6.3  

>M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = -3

Query: 214 ICATYSYYYDGKVENSTAMCTRAVNSNGDAITSGCYT-QTDGSYVTRVCFCRP---IPGG 47
           IC +Y+ +  G +             + D    G Y   ++  +  + C C P   IPGG
Sbjct: 410 ICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGG 469

Query: 46  LPCNNAT 26
            PC++ T
Sbjct: 470 NPCDSET 476


>M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = -3

Query: 214 ICATYSYYYDGKVENSTAMCTRAVNSNGDAITSGCYT-QTDGSYVTRVCFCRP---IPGG 47
           IC +Y+ +  G +             + D    G Y   ++  +  + C C P   IPGG
Sbjct: 410 ICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGG 469

Query: 46  LPCNNAT 26
            PC++ T
Sbjct: 470 NPCDSET 476


>M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = -3

Query: 214 ICATYSYYYDGKVENSTAMCTRAVNSNGDAITSGCYT-QTDGSYVTRVCFCRP---IPGG 47
           IC +Y+ +  G +             + D    G Y   ++  +  + C C P   IPGG
Sbjct: 410 ICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGG 469

Query: 46  LPCNNAT 26
            PC++ T
Sbjct: 470 NPCDSET 476


>BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.
          Length = 1786

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = -3

Query: 214 ICATYSYYYDGKVENSTAMCTRAVNSNGDAITSGCYT-QTDGSYVTRVCFCRP---IPGG 47
           IC +Y+ +  G +             + D    G Y   ++  +  + C C P   IPGG
Sbjct: 410 ICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKSCACNPLGTIPGG 469

Query: 46  LPCNNAT 26
            PC++ T
Sbjct: 470 NPCDSET 476


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,390,922
Number of Sequences: 237096
Number of extensions: 2149842
Number of successful extensions: 4308
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4306
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)