Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a06r
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   1.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   5.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -3

Query: 223 SNDICATYSYYYDGKVENSTAMCTRAVNSNGDAITSGCYTQTDGSYV-TRVC 71
           S DI +  S   D   E S  +C R    + + +      + DG+ V  RVC
Sbjct: 19  SGDILSPSSEPLDNDKEQSAQVCYRGAPQDSENLLGRVLAEFDGTTVLCRVC 70


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +2

Query: 41  WQSSRDRSAEAHSCDVAAVGLRIASASYGV 130
           W SSR     A  C++   G     + YG+
Sbjct: 738 WDSSRLEFEAAQDCELVTAGELFGRSGYGI 767


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 355 NQYKVTNTFLYLYYGFN*LIEDDGTWPDVEYIWRNY 248
           + +  TN +L+     + L+   G  P++ YIW ++
Sbjct: 83  SMHTATNYYLFSLAVSDLLLLISGLPPEIYYIWSHF 118


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 214 YHYWQYRSRLRHNSSKCIPRQATYHHLQL 300
           Y+ +  R  L ++ SKC     +YH + L
Sbjct: 54  YYIYNPRYPLPYSGSKCTWTITSYHRINL 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,151
Number of Sequences: 438
Number of extensions: 4376
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)