Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a05r
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.045
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      24   0.97 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   9.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.045
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +1

Query: 103 TILIIFFQPVTVFLYFFLPVIYNFFNRTTVPAIFYW*NVLRDIF-VHLFIILVVDVEAFL 279
           T+ ++F+ P  +F   FL   Y F+    +    Y+      IF VHL  +L +      
Sbjct: 80  TVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVP 139

Query: 280 IFFVQ*CFY 306
           +FF+  C Y
Sbjct: 140 LFFLL-CIY 147


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 430 ITNDSNVLEKNGGCFSGRITSST 362
           + ++S+   K GGCFSG  T  T
Sbjct: 97  VKSESSQAAKYGGCFSGESTVLT 119


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 270 LYVHNQNYEEMYKYIPKDILPV 205
           LY H  NY+  Y  +P   L +
Sbjct: 166 LYNHTANYDSKYLVLPSGELHI 187


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 121 FQPVTVFLYFFLPVIYNFFNRTTVP 195
           FQ + +FL   +P I  FF    +P
Sbjct: 171 FQILKIFLAHLVPKIAEFFEYRVLP 195


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 273 VSYFFRSVMLLQH*KQFRI 329
           +SY F ++M L+  KQF I
Sbjct: 132 MSYIFANIMGLEFYKQFAI 150


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 273 VSYFFRSVMLLQH*KQFRI 329
           +SY F ++M L+  KQF I
Sbjct: 132 MSYIFANIMGLEFYKQFAI 150


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 99  PYHIDHLLPTSH 134
           PYH +H+ PT++
Sbjct: 51  PYHANHVNPTAN 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,185
Number of Sequences: 336
Number of extensions: 3995
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)