Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a05r
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46996-9|CAA87097.2| 400|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical pr... 36 0.026
Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z49889-2|CAD44149.1| 553|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z49889-1|CAA90066.2| 591|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 29 2.9
Z81074-1|CAB03044.2| 492|Caenorhabditis elegans Hypothetical pr... 28 5.1
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF083223-1|AAD03681.1| 492|Caenorhabditis elegans nuclear recep... 28 5.1
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 28 6.8
U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 28 6.8
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 28 6.8
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 28 6.8
Z72502-8|CAD44097.1| 374|Caenorhabditis elegans Hypothetical pr... 27 9.0
AC024817-31|AAP13742.1| 563|Caenorhabditis elegans Hypothetical... 27 9.0
AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical... 27 9.0
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z46996-9|CAA87097.2| 400|Caenorhabditis elegans Hypothetical
protein C34C12.6 protein.
Length = 400
Score = 44.8 bits (101), Expect = 6e-05
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Frame = -3
Query: 540 MAVSLVLQKIIMMEDDNAMVAGILSILDLDTVKIGHLLQMTPMFLKKMVVAS---QDALP 370
M L+L++ D V I+ I DL+TV I + ++K + S QD P
Sbjct: 147 MLQQLILRREKKQSADKGPVQFIV-IFDLNTVNITDYVNPMSGYMKLWQIRSELWQDWFP 205
Query: 369 VRLKGTHYLNTPTGFETVFNAVKALLNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGG 193
++ + N P ++ + L+E+N KR+ + + + K++P ++P EYGG
Sbjct: 206 EMVQRIYLTNPPRLLGLLWKVARVFLSEENLKRIEIISDKSDLAGKFLPPWLVPKEYGG 264
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 36.7 bits (81), Expect = 0.015
Identities = 26/133 (19%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = -3
Query: 588 IIPGRYDADKYNISDVMAVSLVLQKIIMMEDDNAMVAGILSILDLDTVKIGHLLQMTPMF 409
++P ++D Y + + V+Q I ME + G I DLD + + +
Sbjct: 133 LMPATRNSDLYRMR-IAESEGVMQIIRKMEKEQGKPLGTSVIFDLDGLSMVQIDLAALKV 191
Query: 408 LKKMVVASQDALPVRLKGTHYLNTPTGFETVFNAVKALLNEKNKKRLYVHNQNYEEMYK- 232
+ M+ Q+ P ++ +NTPT + +++ + L ++ ++++ + ++++ K
Sbjct: 192 VTTMLSQLQEMFPDVIRKIFIVNTPTFIQVLWSMISPCLAKQTQQKVKILGNDWKQHLKE 251
Query: 231 YIPKDILPVEYGG 193
I +++L +GG
Sbjct: 252 NIGEEVLFERWGG 264
>Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical
protein F28H7.8 protein.
Length = 410
Score = 35.9 bits (79), Expect = 0.026
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = -3
Query: 345 LNTPTGFETVFNAVKALLNEKNKKRLYVHNQNY-EEMYKYIPKDILPVEYGG 193
+N+P+ +++A+ + E++K+R+ N+ EE+ + K+ LP YGG
Sbjct: 200 INSPSYINVLWSALSPFIPEQSKQRIVFAGSNWKEELLDIVDKECLPERYGG 251
>Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical
protein T03F7.7b protein.
Length = 394
Score = 33.5 bits (73), Expect = 0.14
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 606 SPRVSIIIPGRYDADKYNISDVMAVSLVLQKIIMMEDD--NAMV---------AGILSIL 460
S + + + D I VM +S VL M++++ AM + ++ IL
Sbjct: 102 SKNLHVFVQKMEGTDIKEILKVMPLSYVLHSYFMLQENFSRAMAHTERKTGKTSSVVCIL 161
Query: 459 DLDTVKIGHLLQMT--PMFLKKMVVAS-QDALPVRLKGTHYLNTPTGFETVFNAVKALLN 289
DL + + + P L ++VV + L +N P ++ K L++
Sbjct: 162 DLKGLNLMDFMNPLSGPAQLARLVVQVWAEYFSEHLCKLLLINPPGIISVMWQVTKRLVD 221
Query: 288 EKNKKRLYVHNQNYEEMYKYIPKDILPVEYGG 193
++L N E++ KY+ + +PVEYGG
Sbjct: 222 PNTVEKL-AFLSNVEDLKKYLEPEAIPVEYGG 252
>Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical
protein T03F7.7a protein.
Length = 368
Score = 33.5 bits (73), Expect = 0.14
Identities = 35/152 (23%), Positives = 64/152 (42%), Gaps = 14/152 (9%)
Frame = -3
Query: 606 SPRVSIIIPGRYDADKYNISDVMAVSLVLQKIIMMEDD--NAMV---------AGILSIL 460
S + + + D I VM +S VL M++++ AM + ++ IL
Sbjct: 102 SKNLHVFVQKMEGTDIKEILKVMPLSYVLHSYFMLQENFSRAMAHTERKTGKTSSVVCIL 161
Query: 459 DLDTVKIGHLLQMT--PMFLKKMVVAS-QDALPVRLKGTHYLNTPTGFETVFNAVKALLN 289
DL + + + P L ++VV + L +N P ++ K L++
Sbjct: 162 DLKGLNLMDFMNPLSGPAQLARLVVQVWAEYFSEHLCKLLLINPPGIISVMWQVTKRLVD 221
Query: 288 EKNKKRLYVHNQNYEEMYKYIPKDILPVEYGG 193
++L N E++ KY+ + +PVEYGG
Sbjct: 222 PNTVEKL-AFLSNVEDLKKYLEPEAIPVEYGG 252
>Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical
protein F18A11.2 protein.
Length = 388
Score = 31.1 bits (67), Expect = 0.73
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = -3
Query: 525 VLQKIIMMEDDNAMVAGILSILDLDTVKIG-HLLQMTPMFLKKMVVASQDALPVRLKGTH 349
V QK++ E +G L I+DLD + L+ + + M D P L+
Sbjct: 129 VHQKVVAAERKTGRQSGGLFIMDLDGISFSPKLISVLTGPYRIMWGTLFDHYPQLLQKII 188
Query: 348 YLNTPTGFETVFNAVKALLNEKNKKRLYVHNQ-NYEEMYKYIPKDILPVEYGGN 190
+N P+ + A L E K+++ + ++ + K+ K LP + GG+
Sbjct: 189 IVNAPSFVNVLHQACSPFLPEDYKEKIVITSEPAIGAIQKHADKCFLPSDLGGD 242
>Z47811-2|CAA87786.2| 1307|Caenorhabditis elegans Hypothetical
protein K02C4.3 protein.
Length = 1307
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 162 YWKKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDMFG 49
YW K+K+ D LEE ++ + R PK D FG
Sbjct: 739 YWTYKLKKSIDGLEEWEKLNDQNADRVDWPKVESDSFG 776
>Z49889-2|CAD44149.1| 553|Caenorhabditis elegans Hypothetical
protein T06H11.1b protein.
Length = 553
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/52 (21%), Positives = 23/52 (44%)
Frame = -3
Query: 174 EIIDYWKKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDMFGVEGSFRQLEF 19
+ + +W + V++ W+ + G P D+ GV+G+ +L F
Sbjct: 310 QFVSFWNRSVRKVKQWMSRIRHGRRKSLQSTGGPNDTLDILGVDGTEEKLWF 361
>Z49889-1|CAA90066.2| 591|Caenorhabditis elegans Hypothetical
protein T06H11.1a protein.
Length = 591
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/52 (21%), Positives = 23/52 (44%)
Frame = -3
Query: 174 EIIDYWKKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDMFGVEGSFRQLEF 19
+ + +W + V++ W+ + G P D+ GV+G+ +L F
Sbjct: 348 QFVSFWNRSVRKVKQWMSRIRHGRRKSLQSTGGPNDTLDILGVDGTEEKLWF 399
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -3
Query: 186 GSIEEIIDYWKKKVKEYSDWLEEDDQYGTDESKRPGKPKTAEDMFGVEGS 37
G + I+DY+ +++++YS ++ + Q T+ + PK FGV+G+
Sbjct: 4 GELVHILDYYFRQLRDYSRQVQLERQADTEGRRSSWSPK---HWFGVKGN 50
>Z81074-1|CAB03044.2| 492|Caenorhabditis elegans Hypothetical
protein F32B6.1 protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 177 EEIIDYWKKKVKEYSDWLEEDDQY 106
E++ID W++ YSDW D++
Sbjct: 280 EDLIDGWRRHFTYYSDWCHAMDEF 303
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 28.3 bits (60), Expect = 5.1
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = -3
Query: 432 LLQMTPMFLKKMVVASQDALPVRLKGTHYLNTPTGFETVFNAVKALLNEKNKKRLYVHNQ 253
+ T F K+++ S +P + + Y + F ++ +V+ +L+E K + Q
Sbjct: 205 MFSCTGEFPKQVIYKSTRIIPSKPECITYFD----FSSLLESVENILSETTPKCVPFQCQ 260
Query: 252 NYEEMYKYIPKDILPVEYGGNGGSI-----EEIIDYWKKKVKEYSDWLEEDDQY 106
+ + K+I + N I EE + WK +++ + WL DQY
Sbjct: 261 TPLQRLAFGLKEIRKTQLWDNIPVINCIGKEETFENWKVQIERTTTWLSYMDQY 314
>AF083223-1|AAD03681.1| 492|Caenorhabditis elegans nuclear receptor
NHR-4 protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 177 EEIIDYWKKKVKEYSDWLEEDDQY 106
E++ID W++ YSDW D++
Sbjct: 280 EDLIDGWRRHFTYYSDWCHAMDEF 303
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -3
Query: 198 GGNGGSIEEIIDYWKKKVKEYSDWLEEDDQY 106
G ++++++D WK+ +SDWL +Y
Sbjct: 286 GRRVATVKDVMDEWKRNFVLFSDWLRALPEY 316
>U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical
protein R02F2.7 protein.
Length = 693
Score = 27.9 bits (59), Expect = 6.8
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Frame = -3
Query: 474 ILSILDLDTVKIGHLLQMTPMFLKKMVVASQDALPVRLKGTHYLN------TPTGFETVF 313
++ I +L T+K+ + + P + Q +LK L T F
Sbjct: 310 LIFIENLKTLKLKEITKHLPSIINSCSNTRQITASKKLKNLENLQDFLHNVTEKPENDNF 369
Query: 312 NAVKALLNEKNKKRLYVHNQNY-EEMYKYIPKDIL-PVEYGGNGGSIEEIIDYWKKKVKE 139
+A ALL+ L N N+ E++ K +PKD+L + G G E I+ +KK +E
Sbjct: 370 SAAFALLSINIS--LIFDNWNFCEKILKTLPKDVLEKLIKAGKGSENENILKVFKKVAQE 427
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -3
Query: 198 GGNGGSIEEIIDYWKKKVKEYSDWLEEDDQY 106
G ++++++D WK+ +SDWL +Y
Sbjct: 286 GRRVATVKDVMDEWKRNFVLFSDWLRALPEY 316
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -3
Query: 198 GGNGGSIEEIIDYWKKKVKEYSDWLEEDDQY 106
G ++++++D WK+ +SDWL +Y
Sbjct: 260 GRRVATVKDVMDEWKRNFVLFSDWLRALPEY 290
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 27.9 bits (59), Expect = 6.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -3
Query: 198 GGNGGSIEEIIDYWKKKVKEYSDWLEEDDQY 106
G ++++++D WK+ +SDWL +Y
Sbjct: 225 GRRVATVKDVMDEWKRNFVLFSDWLRALPEY 255
>Z72502-8|CAD44097.1| 374|Caenorhabditis elegans Hypothetical
protein C08B6.11 protein.
Length = 374
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -3
Query: 324 ETVFNAVKALLNEKNKKRLYVHNQNYEEMYKYIPKDILPVEY 199
+T+F + EK++ RL N Y+ + KY+PK+ L EY
Sbjct: 72 DTIFYDELETIAEKSETRLNCLNY-YKMVQKYLPKNALLFEY 112
>AC024817-31|AAP13742.1| 563|Caenorhabditis elegans Hypothetical
protein Y54G2A.17b protein.
Length = 563
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 16 IEFKLPEGSLDPEHILSGLRFPWSLGLVRTILIIFFQPVTVFLYF 150
+ F LP S+D H +GL LV+ +L F+Q + Y+
Sbjct: 1 MSFILPSESIDGTHPCNGLHMNGQDSLVQPLLTDFYQITMCYAYW 45
>AC024214-12|AAF36072.2| 370|Caenorhabditis elegans Hypothetical
protein Y77E11A.2 protein.
Length = 370
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -3
Query: 360 KGTHYLNTPTGFETVFNAVKALLNEKNKKRLYVHNQNYEEMYKYIPKDILPVEYGGNG 187
KGT + NAV+ +++E K + E++ +Y+P+ L + GG+G
Sbjct: 67 KGTKVQELLENEKKQVNAVQEIVSELGKAGISTKVVTREQLAQYLPEADLVISAGGDG 124
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 183 SIEEIIDYWKKKVKEYSDWLEEDDQYGTD 97
S+ +I WKK E+SDW +E+ +Y D
Sbjct: 202 SLNVLISMWKK---EFSDWKDEEFKYFID 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,029,016
Number of Sequences: 27780
Number of extensions: 367739
Number of successful extensions: 1275
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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