Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a05r
(662 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 24 1.1
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 24 1.1
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 24 1.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 1.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 2.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 2.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 2.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 4.5
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 7.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 7.9
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 7.9
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 210 PVEYGGNGG--SIEEIIDYWKKKVKEYSDWLEED 115
P+ + G G S+EEI+D KKK + D +D
Sbjct: 111 PMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKD 144
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 210 PVEYGGNGG--SIEEIIDYWKKKVKEYSDWLEED 115
P+ + G G S+EEI+D KKK + D +D
Sbjct: 111 PMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKD 144
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 210 PVEYGGNGG--SIEEIIDYWKKKVKEYSDWLEED 115
P+ + G G S+EEI+D KKK + D +D
Sbjct: 111 PMGFQGMRGKKSLEEILDEIKKKTTRFQDSRSKD 144
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 291 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 196
N N K+L +N NY E +P I +PV YG
Sbjct: 93 NNNNYKKLQYYNINYIEQIP-VPVPIPVPVYYG 124
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 291 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 196
N N K+L +N NY E +P + +PV YG
Sbjct: 93 NNNNYKKLQYYNINYIEQIP-VPVPVPVPVYYG 124
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 291 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 196
N N K+L +N NY E +P + +PV YG
Sbjct: 93 NNNNYKKLQYYNINYIEQIP-VPVPVPVPVYYG 124
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 291 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 196
N N K+L +N NY E +P + +PV YG
Sbjct: 93 NNNNYKKLQYYNINYIEQIP-VPVPVPVPVYYG 124
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 291 NEKNKKRLYVHNQNYEEMYKYIPKDI-LPVEYG 196
N N K+L +N NY E +P + +PV YG
Sbjct: 326 NNNNYKKLQYYNINYIEQIP-VPVPVPVPVYYG 357
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = -1
Query: 125 WKKMINMVRTSPSDQGNRRPLRICSGSRDPSGNLNSIK 12
+K + +TS S + N+ + CS + P+ S+K
Sbjct: 858 YKPFLIPEQTSISHENNQPTMNKCSDRKRPASQATSVK 895
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 171 IIDYWKKKVKEYSDWLEE 118
IID KK++K DW E
Sbjct: 370 IIDLRKKQLKSLEDWENE 387
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 361 QRYPLFKYSDRIRNCFQCCKSITERKK*ETPLRP 260
+R P + +R CFQ ++++K PL+P
Sbjct: 175 KRQPTSIDLNAVRLCFQVFLEGSQKRKFNVPLQP 208
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 361 QRYPLFKYSDRIRNCFQCCKSITERKK*ETPLRP 260
+R P + +R CFQ ++++K PL+P
Sbjct: 175 KRQPTSIDLNAVRLCFQVFLEGSQKRKFNVPLQP 208
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 68 VFGFPGRL 91
+FGFPGRL
Sbjct: 597 IFGFPGRL 604
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 68 VFGFPGRL 91
+FGFPGRL
Sbjct: 597 IFGFPGRL 604
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.4 bits (43), Expect = 7.9
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = -2
Query: 598 CQYNHTW 578
C+Y+HTW
Sbjct: 159 CEYDHTW 165
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,950
Number of Sequences: 438
Number of extensions: 4939
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -