Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a05f
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    31   0.005
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 31.5 bits (68), Expect = 0.005
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 29  KTSMTMSVRALPPELAEKARKELNEDPSRINSDIQHLKDW 148
           K    +S RA P  +A +  ++LN +  +I  D++ LK W
Sbjct: 272 KLDSLVSSRAWPSRVANQKLRDLNREVDQIKQDVEDLKRW 311


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 25  VENVDDHVCSSVTSGVS 75
           VENV+D   S +T+GV+
Sbjct: 121 VENVEDLFTSGITTGVN 137


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 306 AIHYLMKY*VWGQYWYYLRLQLLILHVSV*SYLADMMLISTI 431
           AI  L +  + G     + +  LI+HVS  +Y+A + + S I
Sbjct: 419 AIFVLCELLIEGTTSILINVPSLIIHVSTSAYVATVWINSVI 460


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 31 NVDDHVCSSVTSGVSRKS 84
          N D+  C+ ++S VSR +
Sbjct: 35 NTDEETCTRISSTVSRNT 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,483
Number of Sequences: 336
Number of extensions: 2991
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)