Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a03f
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.1  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   6.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 407 DETENTIASTTYSETSDKLVS*RFGLG 327
           DET+N  +  TY+E  +KL      LG
Sbjct: 340 DETKNHYSKNTYNEQGNKLADLYKSLG 366


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 407 DETENTIASTTYSETSDKLVS*RFGLG 327
           DET+N  +  TY+E  +KL      LG
Sbjct: 232 DETKNHYSKNTYNEQGNKLADLYKSLG 258


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 409 WNLAPVVVKLLYLASC 456
           WNL P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 409 WNLAPVVVKLLYLASC 456
           WNL P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 33   VNNISKKRKFVGDGVFKAELNEF 101
            VNN S +R+F+   V   E N F
Sbjct: 1915 VNNPSARRRFIAHVVDFIETNNF 1937


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +3

Query: 33  VNNISKKRKFVGDGVFKAELNEFL 104
           +N++ K+R+ V + +FK E++E L
Sbjct: 75  LNDLEKRRE-VYESIFKVEVHEAL 97


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +3

Query: 33  VNNISKKRKFVGDGVFKAELNEFL 104
           +N++ K+R+ V + +FK E++E L
Sbjct: 235 LNDLEKRRE-VYESIFKVEVHEAL 257


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +3

Query: 33  VNNISKKRKFVGDGVFKAELNEFL 104
           +N++ K+R+ V + +FK E++E L
Sbjct: 235 LNDLEKRRE-VYESIFKVEVHEAL 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,724
Number of Sequences: 336
Number of extensions: 3116
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)