Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a02r
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +2

Query: 32  ITIDFHLVHRRLLVQ 76
           I +++H VHR+++VQ
Sbjct: 397 IKVNYHRVHRKIMVQ 411


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +2

Query: 32  ITIDFHLVHRRLLVQ 76
           I +++H VHR+++VQ
Sbjct: 122 IKVNYHRVHRKIMVQ 136


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 431 FVNFHFIIV-LIRLENCSIFVTQYF 360
           F+N  F+   LIRL+NC I+  + F
Sbjct: 131 FINLPFLEHNLIRLKNCVIYFNRIF 155


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 525 INFIKQFLSLSIFSIINLKNLLI 593
           INF+  F  +  +S +   NLL+
Sbjct: 358 INFVSTFFKIPFYSTLRPINLLV 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,174
Number of Sequences: 336
Number of extensions: 2577
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)