Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11a02f
(567 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 36 0.023
SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28) 33 0.16
SB_867| Best HMM Match : Leo1 (HMM E-Value=0) 33 0.22
SB_39863| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_30460| Best HMM Match : DSPc (HMM E-Value=2.5e-38) 32 0.38
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_40714| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 30 1.1
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 30 1.1
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 30 1.1
SB_908| Best HMM Match : DUF1682 (HMM E-Value=3.1e-38) 30 1.1
SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33) 29 2.6
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 29 3.5
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 29 3.5
SB_35007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003) 29 3.5
SB_54030| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_3656| Best HMM Match : bZIP_2 (HMM E-Value=1e-09) 28 4.6
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 28 6.1
SB_40374| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8) 28 6.1
SB_1380| Best HMM Match : RVT_1 (HMM E-Value=1.4e-38) 28 6.1
SB_35774| Best HMM Match : DSPc (HMM E-Value=1e-26) 28 6.1
SB_93| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_50282| Best HMM Match : MSG (HMM E-Value=7) 27 8.1
SB_30818| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_28001| Best HMM Match : Zip (HMM E-Value=3e-18) 27 8.1
SB_27973| Best HMM Match : Fe-ADH (HMM E-Value=5.6e-06) 27 8.1
SB_26827| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_13363| Best HMM Match : COG2 (HMM E-Value=0.081) 27 8.1
SB_59643| Best HMM Match : DUF1610 (HMM E-Value=3.3) 27 8.1
SB_56067| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_52304| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 27 8.1
SB_13031| Best HMM Match : TLD (HMM E-Value=0.18) 27 8.1
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 35.9 bits (79), Expect = 0.023
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +2
Query: 191 E*MSVD-DPESRGSIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRAD----- 352
E M VD D + G I+L + L S ++++ E+ + D + DD+ D D
Sbjct: 193 ELMVVDRDDDDGGDILLVVVVAVLCVVSDDDDDEEEEDDADDDDDDDDDDDDNDDYNETN 252
Query: 353 SGDLNTDVIMKWNDGADISMT 415
+GDLNT I + DG+ + T
Sbjct: 253 NGDLNTSYIYNYGDGSFVLST 273
>SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28)
Length = 246
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 407 SMTGEACACGPTPARLLPEPEPDHLYDHHSSEEELEVINGVPSSAPA 547
+M CA G + RLLP P P HHSS+E + N P PA
Sbjct: 184 NMMNAGCAIGSSGPRLLPPPPPSAY--HHSSQEYPYMANN-PGQVPA 227
>SB_867| Best HMM Match : Leo1 (HMM E-Value=0)
Length = 591
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 209 DPESRGSIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
DPE++ S M+K +LR+ L EN ++ E + + +D+ + GDL +D
Sbjct: 484 DPEAQRSEMIKKEEERLRS-QLRLENQQRRMRERRAYSSEEDDGEEEGLGDLESD 537
>SB_39863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2978
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 197 MSVDDPESRGSIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
+S+ D E ++ML F H E + ++ D + DD++D++DS D +TD
Sbjct: 2561 VSLRDIERAMTVMLWFRRHHQALRPQREPQKDDDDDDEDDSDDDDDDSDQSDS-DSDTD 2618
>SB_30460| Best HMM Match : DSPc (HMM E-Value=2.5e-38)
Length = 550
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +2
Query: 233 MLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEAD 343
MLKFLT K R SLNE E + E DE D
Sbjct: 124 MLKFLTLKFRNQSLNEVRPFEPQDTEIQNVEKGDEED 160
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 31.5 bits (68), Expect = 0.50
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 269 SLNEENVSEKVEEHDSGTESDDEADRADSGDLNTDV 376
S EE + ++ E+HD E ++E D D GD + ++
Sbjct: 162 SSEEEEMDDEDEDHDDDDEEEEEEDEDDDGDGDQEI 197
>SB_40714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 31.5 bits (68), Expect = 0.50
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +2
Query: 182 GPRE*MSVDDPESRGSIMLKFLT--HKLRTHSL---NEENVSEKVEEHDSGTESDDEADR 346
GPR VDD SR S++ K +T H R L +E EK+EE ++DD+ D
Sbjct: 16 GPRYVFLVDD--SRSSVVPKNVTLSHPGRLGELVGKHENGYIEKMEESVQARDNDDDGDF 73
Query: 347 ADSG 358
+D G
Sbjct: 74 SDGG 77
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +2
Query: 275 NEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGEACACGPTPARL 454
N++N + + D + DD+AD D D + D +D D +++ +C +P +L
Sbjct: 73 NDDNGDDDDNDDDDDDDDDDDADDDDDDDDDDDDDDNNHDDRDTTLS--SC-LNDSPVKL 129
Query: 455 LPEPE----PDHLYDHHSSEEELEVINGVPSSAPAC 550
P P P +YD +E+ +++ +P S C
Sbjct: 130 APLPTNTQLPGQIYDR---DEQCKMM--IPGSTGFC 160
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 263 THSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGEACACGPT 442
TH EE + +E TE DD+ ++D D T V + +D+ + PT
Sbjct: 706 THDDQEEQGDQNAKEQSDKTEDDDDKPKSDDQDHKTPVETTETEQSDMDTSESYDPIAPT 765
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 275 NEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
+EE +E + HD G D+E DR D G+ N D
Sbjct: 124 DEERNNEHEDRHDKGRNDDEEEDRHD-GERNDD 155
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 299 VEEHDSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGEAC 427
V + D G E+DD D D GD N D + +DG+ G+ C
Sbjct: 527 VTDDDDGNENDDVDDADDGGDGNDDDDV--DDGSQAGSFGDNC 567
>SB_908| Best HMM Match : DUF1682 (HMM E-Value=3.1e-38)
Length = 326
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 437 PTPARLLPEPEPDHLYDHHSSEEELEVI 520
PT + EPEP+ YDH + EEE E++
Sbjct: 5 PTSSLQSEEPEPEE-YDHFTDEEEFEMV 31
>SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33)
Length = 942
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 272 LNEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGEACACGPTPAR 451
L+E + K E ++ E+DD+ + D D ++D + +D S GE A P
Sbjct: 274 LDELVSAAKSLEEETDDENDDDEESTDDSDESSDDSGESTGDSDTS--GEISASPPIIEA 331
Query: 452 LLPEPEPD 475
LLPE D
Sbjct: 332 LLPEGNLD 339
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 239 KFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGD 361
K + K N+ + S + E+ D G + DDE D D D
Sbjct: 180 KKVDEKKEDDKKNDSSASGESEDSDDGDDEDDEEDEEDEKD 220
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +2
Query: 206 DDPESRGSIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMK 385
++ ES G+ + + K T + E SE+V E + + EA++ +
Sbjct: 132 ENTESEGAKEAEPVAEKTETSATEEVKASEQVSEKEKPDKPVLEAEKPVINGEAFYFCQQ 191
Query: 386 WNDGADISMTGEACACGPTPARLLPE--PEPDHLYDHHSSEEELEVING 526
+ G ++ E PA E P PD L D + +EE ++G
Sbjct: 192 TSRGIAVAYLVEGIFQMIQPAEQAQESDPTPDQLVDANKPDEETSQVSG 240
>SB_35007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = +2
Query: 266 HSLN-EENVSEKVE---EHDSGTESDDEADRADS 355
H+ N EE+ S++ E E +SGT+SDD+ D DS
Sbjct: 100 HTRNAEESASDQSESSSESESGTDSDDDEDDEDS 133
>SB_8349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1104
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +3
Query: 102 IGARVSITNRLILFNNTR---YLCRANATVGRASECRWTIPR 218
IG+R ++ LI F +R Y C N T+ S C W++ R
Sbjct: 962 IGSRTQVSRALIRFVCSRSRFYHCLKNLTIQTRSPCIWSLGR 1003
>SB_6548| Best HMM Match : Helicase_C (HMM E-Value=0.003)
Length = 1063
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 284 NVSEKVE-EHDSGTESDDEADRADSGDLNTDVIMKWNDGADI 406
NV E ++ HD G DD+ D D D+ D +DG DI
Sbjct: 794 NVDEVIDASHDIGDPGDDDDDIDDGDDIEGDDDDDIDDGDDI 835
>SB_54030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 266 HSLNEENVSEKV-EEHDSGTESDDEADRADSGDLNTDVIMK-WNDGADIS 409
+ +N+EN + +E+D E+DD D D D+N D M ND D++
Sbjct: 161 NDMNDENDENDMNDENDMNNENDDN-DMNDDNDMNDDNDMNDMNDDNDMN 209
>SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 272 LNEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
+N ++ S+ ++E D + DD++D D GD+N D
Sbjct: 208 VNNDDDSDVIDEGD--VKDDDDSDVIDEGDVNDD 239
>SB_3656| Best HMM Match : bZIP_2 (HMM E-Value=1e-09)
Length = 241
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 386 WNDGADISMTGEACAC-GPTPARLLPEPEPDHLYDHHSSEEELEVINGVP 532
WN + E C+ G P LLP + ++L D+ S ++E +I G+P
Sbjct: 108 WNQSDTFAGQHEGCSGDGTCPGSLLPV-KSENLDDYWSMDKEEIIITGIP 156
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 448 GRSRPACTRLPSHTDVGAVIP 386
GR PA TRLP+H +G +P
Sbjct: 577 GRPVPAVTRLPTHLPLGRPVP 597
>SB_40374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 278 EENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWNDGAD 403
E ++KV+++D ++DD+ D D G + D I +D D
Sbjct: 46 ERASTQKVDDYDDDDDNDDDDDGYDDGGYDDDDIGDDDDDDD 87
>SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8)
Length = 929
Score = 27.9 bits (59), Expect = 6.1
Identities = 21/100 (21%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +2
Query: 275 NEENVSEKVEEHDS----GTESDDEADRADSGDLNTDVIMKWNDGADISMTGEACACGPT 442
N ++VS+ + D ++SDD ++ A GD +D + ND ++++ G+ + G +
Sbjct: 143 NGDDVSDGASDGDDVSNGASDSDDVSNGASDGDDVSDGVSDGNDVSNVASDGDDVSNGAS 202
Query: 443 PARLLPEPEPDHLYDHHSSEEELEVINGVPSSAPACPGAT 562
+ + D + + +V NG C G +
Sbjct: 203 DSDGVSNGVSDGDDVSNGASNGDDVSNGASDGDDVCNGVS 242
>SB_1380| Best HMM Match : RVT_1 (HMM E-Value=1.4e-38)
Length = 622
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 278 EENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
+++ +K + +D G +D DR D GD + D
Sbjct: 23 DDDYDDKNDNYDDGDYDNDNGDRNDDGDSHDD 54
>SB_35774| Best HMM Match : DSPc (HMM E-Value=1e-26)
Length = 1418
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +2
Query: 272 LNEENVSEKVEEH--DSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGEACACGPTP 445
+ E++V E + +G E DDE + D + + + G D+ + E T
Sbjct: 458 ITEDSVGEGESDDGGSAGFEDDDEEEEEDGSIMMRRFLRDTSSGDDVFYSWETEDIDSTT 517
Query: 446 ARLLPEPEPDHL 481
P+PDH+
Sbjct: 518 PVRSSTPDPDHI 529
>SB_93| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 551 GRPVRSWAPR*SPRVPLQTSGGRRDDRALVQAKVWPESARMHT 423
G+ VR W PR S V + R R L+ VWP +R HT
Sbjct: 364 GKLVRLW-PRLSESVDSNPTPARYTVRLLLVILVWPIISRAHT 405
>SB_50282| Best HMM Match : MSG (HMM E-Value=7)
Length = 228
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 227 SIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGD 361
SI+ K TH T +N + E V E+D + DD+ D D D
Sbjct: 64 SILDKTNTHVEVTSEVNNGDSPEFVVEYDLDDDDDDDDDDDDDDD 108
>SB_30818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 266 HSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
+S+++++ +++ G SDD + DSGD + D
Sbjct: 60 YSVDDDSDDNSIDDDSGGNSSDDYSGEDDSGDDDDD 95
>SB_28001| Best HMM Match : Zip (HMM E-Value=3e-18)
Length = 656
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 266 HSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWN 391
HSL+ + K+E H+ +DDE D + T+V++K N
Sbjct: 478 HSLSVKRKCSKLEHHEGTPPADDE-DEEQKDIVLTNVVVKEN 518
>SB_27973| Best HMM Match : Fe-ADH (HMM E-Value=5.6e-06)
Length = 324
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Frame = +2
Query: 305 EHDSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGEACACG-PTPARLLPEPEPDHL 481
EH+ + DD D D+GD DV + D +D E+ P + D+
Sbjct: 178 EHNCLDDYDDYGDDGDNGDYEIDVNDENGDDSDECENDESHGMSYPISGLVKSYKAKDYD 237
Query: 482 YDHHSSEEELEVINGVPS----SAPACP 553
H L V+ P+ +AP+CP
Sbjct: 238 PSHPIVPHGLSVVVTAPAVFRFTAPSCP 265
>SB_26827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 254 KLRTHSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
+L + ++E++ + + D G +SDD D D GD + D
Sbjct: 11 QLDDNHVDEDDDDDGGDGDDDGNDSDDGGDSDDGGDSDDD 50
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 275 NEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIM 382
++ N S+ + D G +SDD+ D +DS D + ++M
Sbjct: 30 DDGNDSDDGGDSDDGGDSDDDGDDSDSDDGDDRIMM 65
>SB_13363| Best HMM Match : COG2 (HMM E-Value=0.081)
Length = 411
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 266 HSLNEENVSEKVEEHDSGTESDDEAD-RADSGDLNTDVIMKWND 394
H LN EK+E G+ +DD AD DS ++ + +K+N+
Sbjct: 112 HLLNITKSLEKIERLLKGSLADDTADINEDSSSSSSAISLKFNE 155
>SB_59643| Best HMM Match : DUF1610 (HMM E-Value=3.3)
Length = 363
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 275 NEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWNDGADISMTGE 421
N+++V + V++ D ++DD+ D + GD + D +D D+ G+
Sbjct: 64 NDDDVDDNVDD-DVDDDNDDDGDEDEDGDEDDDGDGDEDDDDDVDDDGD 111
>SB_56067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 266 HSLNEENVSEKVEEHDSGTESDDEADRADSGD 361
HS+ E + + + D+ T+SDD+ D D D
Sbjct: 87 HSVLAEKIKQDEVQEDTDTDSDDDDDDDDDDD 118
>SB_52304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 769
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 275 NEENVSEKVEEHDSGTESDDEADRADSG-DLNTDVIMKWNDGAD 403
++++V + D G DD D D G D N D ++ +DG D
Sbjct: 644 SDDDVDSGDDSGDDGECGDDSDDDVDGGDDSNDDTVVDDDDGND 687
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 275 NEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
++++ + ++ D + DD+ D DSGD+N D
Sbjct: 2247 DDDDDDDDDDDDDDDDDDDDDDDDDDSGDVNDD 2279
>SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +2
Query: 170 KRDRGPRE*MSVDDPESRGSIMLKFLTHKLRTHSLNEENVSEKVEEHDSGTESDDEADR 346
KR++ R MS + E R S + +HK HSL+ E + HD+ +ES+ E+ R
Sbjct: 51 KREKRTRGEMSSYEEEGRRS---RRKSHK---HSLSVEETGRRRMRHDTDSESERESRR 103
>SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 275 NEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
++E E+ EE+D + DD+AD D + D
Sbjct: 62 DDEEEEEEEEENDDDDDDDDDADADADADADAD 94
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +2
Query: 80 KWSWNVSHRCESVN-NEPSDLIQ*YSISVPCKRDRGPRE*MSVDDPESRGSIMLKFLTHK 256
K W H + N P +I + + +R GP + + ++ + L
Sbjct: 1083 KGLWLAVHIPDKANVGRPLKIIATKNAANDLERVVGPNKETLFKELQTIIGVDADTLREM 1142
Query: 257 LRTHSLNEENVSEKVEEHDSGTESDDEADRADSGDLNTD 373
L+ + + + + HD +SDD+ ++ D D + D
Sbjct: 1143 LKAGEIQNDKLKHRPVHHDDDDDSDDDEEKEDDDDDDND 1181
>SB_13031| Best HMM Match : TLD (HMM E-Value=0.18)
Length = 175
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +2
Query: 311 DSGTESDDEADRADSGDLN-TDVIMKWNDGADISMTGEACACGPTPARLLPEPE 469
DS +SD + D D + DV+ N G DI + C R+LP E
Sbjct: 119 DSDGDSDSDDDSNDGLYIGYDDVVDDGNSGKDIGSDDDDCDYAYDATRMLPSTE 172
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,198,977
Number of Sequences: 59808
Number of extensions: 351803
Number of successful extensions: 1851
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1807
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -