Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a02f
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    27   0.32 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   3.0  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.5 bits (58), Expect = 0.32
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 275 NEENVSEKVEEHDSGTESDDEADRADSGDLNTDVIMKWNDG 397
           +EE+  ++ E  D+  + +DE D   +G L T  ++   DG
Sbjct: 483 DEEDEEDEYEGDDTEEDEEDEDDELAAGPLGTSDVVTVEDG 523


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 222  RLSGSSTDIHSRGPRSRLHG 163
            ++S    +I+SRGP   LHG
Sbjct: 1223 QVSAQYAEIYSRGPLKNLHG 1242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,536
Number of Sequences: 2352
Number of extensions: 11655
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)