Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11a01r
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012300-1|AAS77425.1|  341|Drosophila melanogaster SD19704p pro...    29   3.1  
AY094845-1|AAM11198.1|  341|Drosophila melanogaster RE04530p pro...    29   3.1  
AE014296-422|AAN12216.1|  341|Drosophila melanogaster CG9018-PB,...    29   3.1  
AE014296-421|AAF47620.1|  375|Drosophila melanogaster CG9018-PA,...    29   3.1  
BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p pro...    29   5.4  
AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA ...    29   5.4  

>BT012300-1|AAS77425.1|  341|Drosophila melanogaster SD19704p
           protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 353 VENVAEPEDLSPVQVVNPIVENSQSEYP--GKRY 258
           +ENV EP+ L+ + + N +++NS+ + P  GK Y
Sbjct: 48  LENVPEPKKLTFMYLANDVIQNSKKKGPEYGKEY 81


>AY094845-1|AAM11198.1|  341|Drosophila melanogaster RE04530p
           protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 353 VENVAEPEDLSPVQVVNPIVENSQSEYP--GKRY 258
           +ENV EP+ L+ + + N +++NS+ + P  GK Y
Sbjct: 48  LENVPEPKKLTFMYLANDVIQNSKKKGPEYGKEY 81


>AE014296-422|AAN12216.1|  341|Drosophila melanogaster CG9018-PB,
           isoform B protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 353 VENVAEPEDLSPVQVVNPIVENSQSEYP--GKRY 258
           +ENV EP+ L+ + + N +++NS+ + P  GK Y
Sbjct: 48  LENVPEPKKLTFMYLANDVIQNSKKKGPEYGKEY 81


>AE014296-421|AAF47620.1|  375|Drosophila melanogaster CG9018-PA,
           isoform A protein.
          Length = 375

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = -3

Query: 353 VENVAEPEDLSPVQVVNPIVENSQSEYP--GKRY 258
           +ENV EP+ L+ + + N +++NS+ + P  GK Y
Sbjct: 48  LENVPEPKKLTFMYLANDVIQNSKKKGPEYGKEY 81


>BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p
           protein.
          Length = 1132

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = -3

Query: 461 ISLLKXDEDGXGRVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQ 282
           I+L    E    +   + P+E  PE   +A++    +    +PE+   V+  +  VE S+
Sbjct: 441 ITLADETEQDSAQPSNEEPVEIAPEQHTEAEIAPAKIPEEGKPEEEVQVEEESKPVEESK 500

Query: 281 SEYPGKRYPDA 249
            E   K+  DA
Sbjct: 501 PEEEIKQQEDA 511


>AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA
           protein.
          Length = 1132

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/71 (25%), Positives = 32/71 (45%)
 Frame = -3

Query: 461 ISLLKXDEDGXGRVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQ 282
           I+L    E    +   + P+E  PE   +A++    +    +PE+   V+  +  VE S+
Sbjct: 441 ITLADETEQDSAQPSNEEPVEIAPEQHTEAEIAPAKIPEEGKPEEEVQVEEESKPVEESK 500

Query: 281 SEYPGKRYPDA 249
            E   K+  DA
Sbjct: 501 PEEEIKQQEDA 511


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,053,170
Number of Sequences: 53049
Number of extensions: 315119
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)