Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p23r
         (678 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB051511-1|BAB21815.1|  400|Homo sapiens KIAA1724 protein protein.    116   1e-25

>AB051511-1|BAB21815.1|  400|Homo sapiens KIAA1724 protein protein.
          Length = 400

 Score =  116 bits (278), Expect = 1e-25
 Identities = 71/204 (34%), Positives = 111/204 (54%), Gaps = 8/204 (3%)
 Frame = -2

Query: 677 GYDVSMWTSSMIFIVAGL------YTPGLVKFHVYGDVSFALFFEVLIHLVGLLGTAPVA 516
           GYD+S  T S ++IV  +      Y P L  F +Y D+     F  +I    L  T P++
Sbjct: 199 GYDISQVTISFVYIVTAVVGVEAWYEPFLFNF-LYRDL-----FTAMIIGCALCVTLPMS 252

Query: 515 VYNVYLARKNRRAKVETLTEALRPVWSMTLILAALIFWADKSKNDIIESDPRAFIFLFGT 336
           + N + + KN   K+ ++ EA+ P++S  L+      W   S +DI+E  PR F F+ GT
Sbjct: 253 LLNFFRSYKNNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMVGT 312

Query: 335 LFSNTASRLMIAGMASQRCELVNWMFWPL-LTGVVTSLYKPEY-ELSILYALVVFSVLAH 162
            F+N+  +L++  M+S RC  +NW+  PL L  +V +L    Y E  +LY L     LAH
Sbjct: 313 AFANSTCQLIVCQMSSTRCPTLNWLLVPLFLVVLVVNLGVASYVESILLYTLTTAFTLAH 372

Query: 161 VHYGICVVKQICGYYKIDCFLVPK 90
           +HYG+ VVKQ+  +++I  F + K
Sbjct: 373 IHYGVRVVKQLSSHFQIYPFSLRK 396


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,652,373
Number of Sequences: 237096
Number of extensions: 2140384
Number of successful extensions: 4623
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4621
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)