Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10p23f
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25585.2 68416.m03183 aminoalcoholphosphotransferase, putativ... 101 4e-22
At3g25585.1 68416.m03182 aminoalcoholphosphotransferase, putativ... 101 4e-22
At1g13560.1 68414.m01590 aminoalcoholphosphotransferase (AAPT1) ... 98 4e-21
At1g13560.2 68414.m01589 aminoalcoholphosphotransferase (AAPT1) ... 60 1e-09
At1g26440.3 68414.m03225 expressed protein similar to SP|Q41706 ... 32 0.38
At1g26440.2 68414.m03224 expressed protein similar to SP|Q41706 ... 32 0.38
At1g26440.1 68414.m03223 expressed protein similar to SP|Q41706 ... 32 0.38
At2g03530.1 68415.m00313 F-box family protein-related similar to... 31 0.87
At3g16890.1 68416.m02159 pentatricopeptide (PPR) repeat-containi... 29 2.0
At2g41440.1 68415.m05120 expressed protein 27 8.1
At2g07440.1 68415.m00852 two-component responsive regulator-rela... 27 8.1
>At3g25585.2 68416.m03183 aminoalcoholphosphotransferase, putative
strong similarity to aminoalcoholphosphotransferase
[Arabidopsis thaliana] GI:3661593; contains Pfam profile
PF01066: CDP-alcohol phosphatidyltransferase
Length = 389
Score = 101 bits (242), Expect = 4e-22
Identities = 52/130 (40%), Positives = 69/130 (53%)
Frame = +3
Query: 252 YLSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVI 431
Y+ + LKK+KYS +D S L+ YV+ P WN + P W+ PN+IT GF+ ++
Sbjct: 3 YIGAHGVAALKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMPPNMITLMGFMFLLTSA 62
Query: 432 LLLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKLGVSGPL 611
LL I+ P W A G+LLFL D +DGKQAR+ S PL
Sbjct: 63 LLGYIYSPKLDSPP-----------PRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPL 111
Query: 612 GELFDHGLDS 641
GELFDHG D+
Sbjct: 112 GELFDHGCDA 121
>At3g25585.1 68416.m03182 aminoalcoholphosphotransferase, putative
strong similarity to aminoalcoholphosphotransferase
[Arabidopsis thaliana] GI:3661593; contains Pfam profile
PF01066: CDP-alcohol phosphatidyltransferase
Length = 389
Score = 101 bits (242), Expect = 4e-22
Identities = 52/130 (40%), Positives = 69/130 (53%)
Frame = +3
Query: 252 YLSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVI 431
Y+ + LKK+KYS +D S L+ YV+ P WN + P W+ PN+IT GF+ ++
Sbjct: 3 YIGAHGVAALKKHKYSGVDHSYLAKYVLQPFWNRFVKIFPLWMPPNMITLMGFMFLLTSA 62
Query: 432 LLLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKLGVSGPL 611
LL I+ P W A G+LLFL D +DGKQAR+ S PL
Sbjct: 63 LLGYIYSPKLDSPP-----------PRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPL 111
Query: 612 GELFDHGLDS 641
GELFDHG D+
Sbjct: 112 GELFDHGCDA 121
>At1g13560.1 68414.m01590 aminoalcoholphosphotransferase (AAPT1)
identical to aminoalcoholphosphotransferase GI:3661593
from [Arabidopsis thaliana]
Length = 389
Score = 98.3 bits (234), Expect = 4e-21
Identities = 51/130 (39%), Positives = 67/130 (51%)
Frame = +3
Query: 252 YLSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVI 431
Y+ + L +YKYS +D S L+ YV+ P W + P W+ PN+IT GF+ +V
Sbjct: 3 YIGAHGVAALHRYKYSGVDHSYLAKYVLQPFWTRFVKVFPLWMPPNMITLMGFMFLVTSS 62
Query: 432 LLLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKLGVSGPL 611
LL I+ P W A G+LLFL D +DGKQAR+ S PL
Sbjct: 63 LLGYIYSPQLDSPP-----------PRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPL 111
Query: 612 GELFDHGLDS 641
GELFDHG D+
Sbjct: 112 GELFDHGCDA 121
>At1g13560.2 68414.m01589 aminoalcoholphosphotransferase (AAPT1)
identical to aminoalcoholphosphotransferase GI:3661593
from [Arabidopsis thaliana]
Length = 346
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +3
Query: 507 PNWALMACGVLLFLAYNLDGIDGKQARKLGVSGPLGELFDHGLDS 641
P W A G+LLFL D +DGKQAR+ S PLGELFDHG D+
Sbjct: 34 PRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDA 78
>At1g26440.3 68414.m03225 expressed protein similar to SP|Q41706 A3
protein (unknown function) {Vigna unguiculata}
Length = 413
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +3
Query: 312 SPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDYD---FHGAERLR 482
SPL N + W+ + + +PK I + C VI + L F Y R
Sbjct: 258 SPLFNLATNDQWHTLKQGVPKLIVYTAFFYFSLSCFVIAVALNISFLYKPVLDSPRSSFR 317
Query: 483 QGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQA 584
+ + ++ WAL A G+L L + G+ A
Sbjct: 318 EYLSDWNGRGWAL-AAGLLCGFGNGLQFMGGQAA 350
>At1g26440.2 68414.m03224 expressed protein similar to SP|Q41706 A3
protein (unknown function) {Vigna unguiculata}
Length = 413
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +3
Query: 312 SPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDYD---FHGAERLR 482
SPL N + W+ + + +PK I + C VI + L F Y R
Sbjct: 258 SPLFNLATNDQWHTLKQGVPKLIVYTAFFYFSLSCFVIAVALNISFLYKPVLDSPRSSFR 317
Query: 483 QGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQA 584
+ + ++ WAL A G+L L + G+ A
Sbjct: 318 EYLSDWNGRGWAL-AAGLLCGFGNGLQFMGGQAA 350
>At1g26440.1 68414.m03223 expressed protein similar to SP|Q41706 A3
protein (unknown function) {Vigna unguiculata}
Length = 377
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +3
Query: 312 SPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDYD---FHGAERLR 482
SPL N + W+ + + +PK I + C VI + L F Y R
Sbjct: 222 SPLFNLATNDQWHTLKQGVPKLIVYTAFFYFSLSCFVIAVALNISFLYKPVLDSPRSSFR 281
Query: 483 QGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQA 584
+ + ++ WAL A G+L L + G+ A
Sbjct: 282 EYLSDWNGRGWAL-AAGLLCGFGNGLQFMGGQAA 314
>At2g03530.1 68415.m00313 F-box family protein-related similar to A3
protein (Swiss-Prot:Q41706)(unknown function) [Vigna
unguiculata]; contains 9 transmembrane domains;
supported by tandem duplication of F-box family protein
(GI:3805763) (TIGR_Ath1:At2g07140) [Arabidopsis
thaliana]
Length = 385
Score = 30.7 bits (66), Expect = 0.87
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 312 SPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVILLLTIFDY 455
SP N + WN + + +PK + + C +I ++L +F Y
Sbjct: 234 SPAFNLATNDQWNRLKQGVPKLVVYTAFFYFSVSCFIIALILNVVFLY 281
>At3g16890.1 68416.m02159 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 659
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 249 KYLSQNHFDGLKK--YKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFV 413
+YL Q DGL Y Y+A+ + + F+T + I+PNL+TF F+
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
>At2g41440.1 68415.m05120 expressed protein
Length = 544
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 244 SKSFSMVVIRFLQILTRLQ 188
S S V+IRFLQ++TRLQ
Sbjct: 22 SNESSCVLIRFLQVITRLQ 40
>At2g07440.1 68415.m00852 two-component responsive regulator-related
/ response regulator protein-related similar to response
regulator 5 GI:3953599 from [Arabidopsis thaliana];
non-consensus (GC) donor site at intron 1
Length = 136
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -2
Query: 362 SSDKVPTRMHNIVAKRACVDGAVLIFLKPVKMV 264
SS+ VPTR+ + K GA FLKPVK+V
Sbjct: 22 SSENVPTRISRCLEK-----GAEEFFLKPVKLV 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,738,984
Number of Sequences: 28952
Number of extensions: 287441
Number of successful extensions: 678
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -