Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p21r
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    27   0.16 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   1.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 367 WEDTRGRACDPCCPCRTVLHH 429
           W +T   ACDP  P +TV +H
Sbjct: 514 WRETGEAACDPYRPWQTVYNH 534


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 494 TAGFSQGRIGFLGGGSCFWTQIWCSTVRHGQQ 399
           T G + GRI  +G G   W Q++   V H  Q
Sbjct: 183 TLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQ 214


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 494 TAGFSQGRIGFLGGGSCFWTQIWCSTVRHGQQ 399
           T G + GRI  +G G   W Q++   V H  Q
Sbjct: 497 TLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQ 528


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 494 TAGFSQGRIGFLGGGSCFWTQIWCSTVRHGQQ 399
           T G + GRI  +G G   W Q++   V H  Q
Sbjct: 730 TLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQ 761


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 494 TAGFSQGRIGFLGGGSCFWTQIWCSTVRHGQQ 399
           T G + GRI  +G G   W Q++   V H  Q
Sbjct: 730 TLGAACGRIHPIGSGGMVWYQMFEYAVGHWMQ 761


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 679  SFMCVGVQLCKSSHVAVLGLGGGSL 605
            SF  +G+   KS  +  +GLGGG +
Sbjct: 2138 SFDDIGMIRHKSEFIKAMGLGGGMI 2162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,204
Number of Sequences: 336
Number of extensions: 3498
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)