SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p21r
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    24   1.7  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    23   2.2  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    23   2.2  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    23   2.2  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    23   2.2  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    23   2.2  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    23   2.2  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    23   2.2  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    23   2.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.9  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   6.8  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   6.8  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   6.8  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   6.8  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.0  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
 Frame = +3

Query: 612 PPPSPRTATWLDLH---SCTPTHMKEW 683
           P P PR AT   LH   + TP  + +W
Sbjct: 417 PKPFPRRATLAQLHNFTTMTPQEIAQW 443


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  YTFKHNYTLRNNINGLQKIFY 73
           Y+  +NY   NN N  +K++Y
Sbjct: 91  YSNYNNYNNNNNYNNYKKLYY 111


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  YTFKHNYTLRNNINGLQKIFY 73
           Y+  +NY   NN N  +K++Y
Sbjct: 91  YSNYNNYNNNNNYNNYKKLYY 111


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  YTFKHNYTLRNNINGLQKIFY 73
           Y+  +NY   NN N  +K++Y
Sbjct: 91  YSNYNNYNNNNNYNNYKKLYY 111


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  YTFKHNYTLRNNINGLQKIFY 73
           Y+  +NY   NN N  +K++Y
Sbjct: 91  YSNYNNYNNNNNYNNYKKLYY 111


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  YTFKHNYTLRNNINGLQKIFY 73
           Y+  +NY   NN N  +K++Y
Sbjct: 91  YSNYNNYNNNNNYNNYKKLYY 111


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  YTFKHNYTLRNNINGLQKIFY 73
           Y+  +NY   NN N  +K++Y
Sbjct: 91  YSNYNNYNNNNNYNNYKKLYY 111


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  YTFKHNYTLRNNINGLQKIFY 73
           Y+  +NY   NN N  +K++Y
Sbjct: 91  YSNYNNYNNNNNYNNYKKLYY 111


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 11  YTFKHNYTLRNNINGLQKIFY 73
           Y+  +NY   NN N  +K++Y
Sbjct: 91  YSNYNNYNNNNNYNNYKKLYY 111


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -2

Query: 166 KPYENDAL---ETAVRSLNSAARSQNLVNVKCVDIKDFLQSINII 41
           K YE D       A++ + SAA +  L N     I  FL+ +N+I
Sbjct: 444 KTYERDTCLLASDALKQILSAAYNVELHNSSPFSIYSFLERLNLI 488


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -2

Query: 166 KPYENDAL---ETAVRSLNSAARSQNLVNVKCVDIKDFLQSINII 41
           K YE D       A++ + SAA +  L N     I  FL+ +N+I
Sbjct: 482 KTYERDTCLLASDALKQILSAAYNVELHNSSPFSIYSFLERLNLI 526


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 8   RYTFKHNYTLRNNINGLQKIFYINAFD 88
           R+T+K N        G+ +IF   AFD
Sbjct: 500 RFTYKININSDKETKGMMRIFLGPAFD 526


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 8   RYTFKHNYTLRNNINGLQKIFYINAFD 88
           R+T+K N        G+ +IF   AFD
Sbjct: 500 RFTYKININSDKETKGMMRIFLGPAFD 526


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 17  FKHNYTLRNNINGLQKIFY 73
           +K+NY   N  N  +K++Y
Sbjct: 96  YKYNYNNNNYNNNCKKLYY 114


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 17  FKHNYTLRNNINGLQKIFY 73
           +K+NY   N  N  +K++Y
Sbjct: 96  YKYNYNNNNYNNNCKKLYY 114


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 17  FKHNYTLRNNINGLQKIFY 73
           +K+NY   N  N  +K++Y
Sbjct: 96  YKYNYNNNNYNNNCKKLYY 114


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 17  FKHNYTLRNNINGLQKIFY 73
           +K+NY   N  N  +K++Y
Sbjct: 96  YKYNYNNNNYNNNCKKLYY 114


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +2

Query: 494 FIIQFQVEVLCGDLKHRGVQLHGGHVEVLPASPQEHTETTPAEPKDRDV 640
           F ++F +     D+K  G  L   + E+L A      E  P EPK   V
Sbjct: 380 FTVEFGLCKEGPDVKAYGAGLLSAYGELLHALTSGKCEHRPFEPKSTAV 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,493
Number of Sequences: 438
Number of extensions: 4393
Number of successful extensions: 29
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -