BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10p21r (728 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.7 DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.2 DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.2 DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.2 DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.2 DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.2 DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.2 DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.2 DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.2 DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.2 DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.2 EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 2.9 EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 2.9 DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 6.8 DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.8 DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.8 DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.8 AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 9.0 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 23.8 bits (49), Expect = 1.7 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%) Frame = +3 Query: 612 PPPSPRTATWLDLH---SCTPTHMKEW 683 P P PR AT LH + TP + +W Sbjct: 417 PKPFPRRATLAQLHNFTTMTPQEIAQW 443 >DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 23.4 bits (48), Expect = 2.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 11 YTFKHNYTLRNNINGLQKIFY 73 Y+ +NY NN N +K++Y Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111 >DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex determiner protein. Length = 182 Score = 23.4 bits (48), Expect = 2.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 11 YTFKHNYTLRNNINGLQKIFY 73 Y+ +NY NN N +K++Y Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111 >DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 23.4 bits (48), Expect = 2.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 11 YTFKHNYTLRNNINGLQKIFY 73 Y+ +NY NN N +K++Y Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111 >DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 23.4 bits (48), Expect = 2.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 11 YTFKHNYTLRNNINGLQKIFY 73 Y+ +NY NN N +K++Y Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111 >DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 23.4 bits (48), Expect = 2.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 11 YTFKHNYTLRNNINGLQKIFY 73 Y+ +NY NN N +K++Y Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111 >DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 23.4 bits (48), Expect = 2.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 11 YTFKHNYTLRNNINGLQKIFY 73 Y+ +NY NN N +K++Y Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111 >DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 23.4 bits (48), Expect = 2.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 11 YTFKHNYTLRNNINGLQKIFY 73 Y+ +NY NN N +K++Y Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111 >DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex determiner protein. Length = 183 Score = 23.4 bits (48), Expect = 2.2 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 11 YTFKHNYTLRNNINGLQKIFY 73 Y+ +NY NN N +K++Y Sbjct: 91 YSNYNNYNNNNNYNNYKKLYY 111 >DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase isoform B protein. Length = 931 Score = 23.4 bits (48), Expect = 2.2 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = -2 Query: 166 KPYENDAL---ETAVRSLNSAARSQNLVNVKCVDIKDFLQSINII 41 K YE D A++ + SAA + L N I FL+ +N+I Sbjct: 444 KTYERDTCLLASDALKQILSAAYNVELHNSSPFSIYSFLERLNLI 488 >DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase isoform A protein. Length = 969 Score = 23.4 bits (48), Expect = 2.2 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = -2 Query: 166 KPYENDAL---ETAVRSLNSAARSQNLVNVKCVDIKDFLQSINII 41 K YE D A++ + SAA + L N I FL+ +N+I Sbjct: 482 KTYERDTCLLASDALKQILSAAYNVELHNSSPFSIYSFLERLNLI 526 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 23.0 bits (47), Expect = 2.9 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 8 RYTFKHNYTLRNNINGLQKIFYINAFD 88 R+T+K N G+ +IF AFD Sbjct: 500 RFTYKININSDKETKGMMRIFLGPAFD 526 >EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. Length = 686 Score = 23.0 bits (47), Expect = 2.9 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 8 RYTFKHNYTLRNNINGLQKIFYINAFD 88 R+T+K N G+ +IF AFD Sbjct: 500 RFTYKININSDKETKGMMRIFLGPAFD 526 >DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex determiner protein. Length = 186 Score = 21.8 bits (44), Expect = 6.8 Identities = 7/19 (36%), Positives = 12/19 (63%) Frame = +2 Query: 17 FKHNYTLRNNINGLQKIFY 73 +K+NY N N +K++Y Sbjct: 96 YKYNYNNNNYNNNCKKLYY 114 >DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.8 bits (44), Expect = 6.8 Identities = 7/19 (36%), Positives = 12/19 (63%) Frame = +2 Query: 17 FKHNYTLRNNINGLQKIFY 73 +K+NY N N +K++Y Sbjct: 96 YKYNYNNNNYNNNCKKLYY 114 >DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.8 bits (44), Expect = 6.8 Identities = 7/19 (36%), Positives = 12/19 (63%) Frame = +2 Query: 17 FKHNYTLRNNINGLQKIFY 73 +K+NY N N +K++Y Sbjct: 96 YKYNYNNNNYNNNCKKLYY 114 >DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.8 bits (44), Expect = 6.8 Identities = 7/19 (36%), Positives = 12/19 (63%) Frame = +2 Query: 17 FKHNYTLRNNINGLQKIFY 73 +K+NY N N +K++Y Sbjct: 96 YKYNYNNNNYNNNCKKLYY 114 >AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase protein. Length = 510 Score = 21.4 bits (43), Expect = 9.0 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = +2 Query: 494 FIIQFQVEVLCGDLKHRGVQLHGGHVEVLPASPQEHTETTPAEPKDRDV 640 F ++F + D+K G L + E+L A E P EPK V Sbjct: 380 FTVEFGLCKEGPDVKAYGAGLLSAYGELLHALTSGKCEHRPFEPKSTAV 428 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 199,493 Number of Sequences: 438 Number of extensions: 4393 Number of successful extensions: 29 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 29 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22657590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -