BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10p13r (755 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 45 8e-05 SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 43 3e-04 SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 40 0.002 SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 37 0.020 SB_57337| Best HMM Match : Sigma70_r2 (HMM E-Value=8.6) 33 0.19 SB_33359| Best HMM Match : DGPF (HMM E-Value=2.7) 31 1.3 SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_49846| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_45090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_21551| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0016) 29 4.1 SB_17642| Best HMM Match : DUF1128 (HMM E-Value=0.92) 29 4.1 SB_47645| Best HMM Match : Pox_H7 (HMM E-Value=4.7) 29 4.1 SB_36946| Best HMM Match : ResIII (HMM E-Value=0.47) 29 4.1 SB_34516| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012) 29 5.4 SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09) 29 5.4 SB_35941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4 SB_3709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4 SB_18494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1 SB_6452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1 SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4 SB_35049| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4 >SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0) Length = 1240 Score = 44.8 bits (101), Expect = 8e-05 Identities = 19/82 (23%), Positives = 42/82 (51%) Frame = -2 Query: 709 RQTVLQFACNLGHTKCIQESYDKFREMRSGKWVSPQIRRNVYMTGMREGDSSDFEYLLNR 530 R VL+ G +C +F + G+ + P +R +Y TG+ G +F+Y+ + Sbjct: 983 RSYVLKLCARYGDVECATAVKSRFADWMRGESLPPNLRSVIYDTGVHLGGEKEFKYMYEQ 1042 Query: 529 FRQSNFANDQLEMLRGLGASKD 464 + +S A ++ ++L + A+++ Sbjct: 1043 YNKSTVAAEKRKLLFAMSATQN 1064 >SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) Length = 890 Score = 42.7 bits (96), Expect = 3e-04 Identities = 19/60 (31%), Positives = 34/60 (56%) Frame = -2 Query: 640 FREMRSGKWVSPQIRRNVYMTGMREGDSSDFEYLLNRFRQSNFANDQLEMLRGLGASKDS 461 +R G+ + P +RR VY G+ G ++ +L ++ ++ A+DQ M+ GL A+K S Sbjct: 747 YRAPPRGRRIPPNLRRLVYSQGVANGGEKEWNFLFDQLSKNPSASDQRRMIVGLAATKQS 806 >SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) Length = 453 Score = 39.9 bits (89), Expect = 0.002 Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Frame = -2 Query: 709 RQTVLQFACNLGHTKCIQESYDKFREMRSGK--WVSPQIRRNVYMTGMREGDSSDFEYLL 536 R +L AC++G + + + F+E ++G+ +S +R VY G+ +++++ Sbjct: 138 RGAILGSACSVGLPEAVGNASRIFKEWQTGERASISVDLRSIVYRYGIAATGPDEWDWMF 197 Query: 535 NRFRQSNFANDQLEMLRGLGASKDS 461 R++ S A++++ +L LG SK + Sbjct: 198 ARYQASMDASEKISLLEALGHSKQT 222 >SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0) Length = 791 Score = 36.7 bits (81), Expect = 0.020 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -2 Query: 613 VSPQIRRNVYMTGMREGDSSDFEYLLNRFRQSNFANDQLEMLRGLGASKD 464 V+P +R+ VY G+ G D+E + NR S A++ +L GL S+D Sbjct: 685 VTPVLRKLVYHYGVALGTPEDWERVYNRIHTSVIASEMQPLLYGLAGSRD 734 >SB_57337| Best HMM Match : Sigma70_r2 (HMM E-Value=8.6) Length = 220 Score = 33.5 bits (73), Expect = 0.19 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = -2 Query: 715 MARQTVLQFACNLGHTKCIQESYDKFREMRSGKW---VSPQIRRNVYMTGMREGDSSDFE 545 + R+ ++ AC+ G C+ + F+ + + P R VY G+ G +++ Sbjct: 2 LLREVIVGLACSCGEVTCVNNATAMFQAWMANSTANPIPPNFRHLVYSYGVAYGGVKEWD 61 Query: 544 YLLNRFRQSNFANDQLEMLRGLGASK 467 + +++ A + +L GL +K Sbjct: 62 FAFKQYKTIKDATAKDAILHGLFGTK 87 >SB_33359| Best HMM Match : DGPF (HMM E-Value=2.7) Length = 305 Score = 30.7 bits (66), Expect = 1.3 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ D F LLNR R+ N +N+ + LR Sbjct: 1 MRQKDDRHFAELLNRLREGNHSNEDIAKLR 30 >SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1387 Score = 29.5 bits (63), Expect = 3.1 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -1 Query: 104 ISCCTGQCNRSCDVCCIIG 48 + C TGQC +SC C +G Sbjct: 978 VECMTGQCGKSCPAHCCLG 996 >SB_49846| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 141 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 27 MRQRESKDFAELLNRLREGNHTKEDIIKLK 56 >SB_45090| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 136 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 1 MRQRESKDFAELLNRLREGNHTKEDIIKLK 30 >SB_21551| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0016) Length = 999 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 27 MRQRESKDFAELLNRLREGNHTKEDIIKLK 56 >SB_17642| Best HMM Match : DUF1128 (HMM E-Value=0.92) Length = 1100 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 977 MRQRESKDFAELLNRLREGNHTKEDIIKLK 1006 >SB_47645| Best HMM Match : Pox_H7 (HMM E-Value=4.7) Length = 220 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 27 MRQRESKDFAELLNRLREGNHTKEDIIKLK 56 >SB_36946| Best HMM Match : ResIII (HMM E-Value=0.47) Length = 979 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 912 MRQRESKDFAELLNRLREGNHTKEDIIKLK 941 >SB_34516| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 814 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 27 MRQRESKDFAELLNRLREGNHTKEDIIKLK 56 >SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012) Length = 966 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 452 MRQRESKDFAELLNRLREGNHTKEYIIKLK 481 >SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09) Length = 916 Score = 28.7 bits (61), Expect = 5.4 Identities = 16/59 (27%), Positives = 24/59 (40%) Frame = -2 Query: 385 YALLGNQENANTVLQFVKNNIAAIRTAYIEDAPPTPVHTALSNLAAYLDESGLDEYETW 209 Y LGN+E TV ++VK + E T T ++ +GL +Y W Sbjct: 421 YEYLGNEETDKTVAEYVKYFDGGTSEKFKESIRNTVYVTQMAETIWGKSNTGLSQYVVW 479 >SB_35941| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 414 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485 MR+ +S DF LLNR R+ N + + L+ Sbjct: 210 MRQRESKDFAELLNRLRERNHTKEDIIKLK 239 >SB_3709| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 28.7 bits (61), Expect = 5.4 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = -2 Query: 397 TSFNYALLGN-QENANTVLQFVKNNIAAIRTAYIEDAPPTPVHTALSNLAAYLDESGLDE 221 TS+ A+ N + N T+L+ + I T+Y ED P L ++A LD+ LD Sbjct: 114 TSWPQAMAENIRNNDETILK----SCDKILTSYQEDLLPAESFMELCDVAGVLDQ--LDN 167 Query: 220 YETWLRSTQTNIPQ 179 +T+L + +PQ Sbjct: 168 VDTFLSDIISGLPQ 181 >SB_18494| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1867 Score = 28.3 bits (60), Expect = 7.1 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -2 Query: 574 MREGDSSDFEYLLNRFRQSNFANDQL 497 MR+ +S DF LLNR R+ N + + Sbjct: 1317 MRQRESKDFAELLNRLREGNHTKEDI 1342 >SB_6452| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 342 Score = 28.3 bits (60), Expect = 7.1 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 353 HGSPVREEQYCCYKNGIH*RRSTNSSAYSFV*SRCLP 243 HG V E +++G+ R S NSS Y+F + C+P Sbjct: 33 HGDLVNLESLA-WQDGLRPRYSVNSSGYTFAYNPCVP 68 >SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1320 Score = 27.9 bits (59), Expect = 9.4 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = -2 Query: 244 LDESGLDEYETWLRSTQTNIPQYNSALSAINSARSNIAWGT 122 +D L +Y+ + T Y+ SA+N AR +WGT Sbjct: 132 VDSFQLMDYDLLNKLTNIGSKDYHLMKSAVNEARQQRSWGT 172 >SB_35049| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 272 Score = 27.9 bits (59), Expect = 9.4 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 307 AYIEDAPPTPVHTALSNLAAYLDESGLDEYETWLRS 200 A +PP P +N AA L +S LD++ W+ S Sbjct: 38 ALTSTSPPPPPRRHFANRAANLIKSELDKFADWILS 73 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,999,771 Number of Sequences: 59808 Number of extensions: 419412 Number of successful extensions: 1772 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1704 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1772 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 2058295707 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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