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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p13r
         (755 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0)                45   8e-05
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)                 43   3e-04
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)                   40   0.002
SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0)                37   0.020
SB_57337| Best HMM Match : Sigma70_r2 (HMM E-Value=8.6)                33   0.19 
SB_33359| Best HMM Match : DGPF (HMM E-Value=2.7)                      31   1.3  
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_49846| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_45090| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_21551| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0016)          29   4.1  
SB_17642| Best HMM Match : DUF1128 (HMM E-Value=0.92)                  29   4.1  
SB_47645| Best HMM Match : Pox_H7 (HMM E-Value=4.7)                    29   4.1  
SB_36946| Best HMM Match : ResIII (HMM E-Value=0.47)                   29   4.1  
SB_34516| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012)         29   5.4  
SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)                 29   5.4  
SB_35941| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_3709| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.4  
SB_18494| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_6452| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.1  
SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_35049| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  

>SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
          Length = 1240

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 19/82 (23%), Positives = 42/82 (51%)
 Frame = -2

Query: 709  RQTVLQFACNLGHTKCIQESYDKFREMRSGKWVSPQIRRNVYMTGMREGDSSDFEYLLNR 530
            R  VL+     G  +C      +F +   G+ + P +R  +Y TG+  G   +F+Y+  +
Sbjct: 983  RSYVLKLCARYGDVECATAVKSRFADWMRGESLPPNLRSVIYDTGVHLGGEKEFKYMYEQ 1042

Query: 529  FRQSNFANDQLEMLRGLGASKD 464
            + +S  A ++ ++L  + A+++
Sbjct: 1043 YNKSTVAAEKRKLLFAMSATQN 1064


>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
          Length = 890

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 19/60 (31%), Positives = 34/60 (56%)
 Frame = -2

Query: 640 FREMRSGKWVSPQIRRNVYMTGMREGDSSDFEYLLNRFRQSNFANDQLEMLRGLGASKDS 461
           +R    G+ + P +RR VY  G+  G   ++ +L ++  ++  A+DQ  M+ GL A+K S
Sbjct: 747 YRAPPRGRRIPPNLRRLVYSQGVANGGEKEWNFLFDQLSKNPSASDQRRMIVGLAATKQS 806


>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
          Length = 453

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 21/85 (24%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
 Frame = -2

Query: 709 RQTVLQFACNLGHTKCIQESYDKFREMRSGK--WVSPQIRRNVYMTGMREGDSSDFEYLL 536
           R  +L  AC++G  + +  +   F+E ++G+   +S  +R  VY  G+      +++++ 
Sbjct: 138 RGAILGSACSVGLPEAVGNASRIFKEWQTGERASISVDLRSIVYRYGIAATGPDEWDWMF 197

Query: 535 NRFRQSNFANDQLEMLRGLGASKDS 461
            R++ S  A++++ +L  LG SK +
Sbjct: 198 ARYQASMDASEKISLLEALGHSKQT 222


>SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
          Length = 791

 Score = 36.7 bits (81), Expect = 0.020
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -2

Query: 613 VSPQIRRNVYMTGMREGDSSDFEYLLNRFRQSNFANDQLEMLRGLGASKD 464
           V+P +R+ VY  G+  G   D+E + NR   S  A++   +L GL  S+D
Sbjct: 685 VTPVLRKLVYHYGVALGTPEDWERVYNRIHTSVIASEMQPLLYGLAGSRD 734


>SB_57337| Best HMM Match : Sigma70_r2 (HMM E-Value=8.6)
          Length = 220

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = -2

Query: 715 MARQTVLQFACNLGHTKCIQESYDKFREMRSGKW---VSPQIRRNVYMTGMREGDSSDFE 545
           + R+ ++  AC+ G   C+  +   F+   +      + P  R  VY  G+  G   +++
Sbjct: 2   LLREVIVGLACSCGEVTCVNNATAMFQAWMANSTANPIPPNFRHLVYSYGVAYGGVKEWD 61

Query: 544 YLLNRFRQSNFANDQLEMLRGLGASK 467
           +   +++    A  +  +L GL  +K
Sbjct: 62  FAFKQYKTIKDATAKDAILHGLFGTK 87


>SB_33359| Best HMM Match : DGPF (HMM E-Value=2.7)
          Length = 305

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
           MR+ D   F  LLNR R+ N +N+ +  LR
Sbjct: 1   MRQKDDRHFAELLNRLREGNHSNEDIAKLR 30


>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1387

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 104  ISCCTGQCNRSCDVCCIIG 48
            + C TGQC +SC   C +G
Sbjct: 978  VECMTGQCGKSCPAHCCLG 996


>SB_49846| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 141

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
           MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 27  MRQRESKDFAELLNRLREGNHTKEDIIKLK 56


>SB_45090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 136

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
           MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 1   MRQRESKDFAELLNRLREGNHTKEDIIKLK 30


>SB_21551| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0016)
          Length = 999

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
           MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 27  MRQRESKDFAELLNRLREGNHTKEDIIKLK 56


>SB_17642| Best HMM Match : DUF1128 (HMM E-Value=0.92)
          Length = 1100

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574  MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
            MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 977  MRQRESKDFAELLNRLREGNHTKEDIIKLK 1006


>SB_47645| Best HMM Match : Pox_H7 (HMM E-Value=4.7)
          Length = 220

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
           MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 27  MRQRESKDFAELLNRLREGNHTKEDIIKLK 56


>SB_36946| Best HMM Match : ResIII (HMM E-Value=0.47)
          Length = 979

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574  MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
            MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 912  MRQRESKDFAELLNRLREGNHTKEDIIKLK 941


>SB_34516| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 814

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
           MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 27  MRQRESKDFAELLNRLREGNHTKEDIIKLK 56


>SB_50552| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00012)
          Length = 966

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
           MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 452 MRQRESKDFAELLNRLREGNHTKEYIIKLK 481


>SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)
          Length = 916

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = -2

Query: 385 YALLGNQENANTVLQFVKNNIAAIRTAYIEDAPPTPVHTALSNLAAYLDESGLDEYETW 209
           Y  LGN+E   TV ++VK         + E    T   T ++        +GL +Y  W
Sbjct: 421 YEYLGNEETDKTVAEYVKYFDGGTSEKFKESIRNTVYVTQMAETIWGKSNTGLSQYVVW 479


>SB_35941| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 414

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 574 MREGDSSDFEYLLNRFRQSNFANDQLEMLR 485
           MR+ +S DF  LLNR R+ N   + +  L+
Sbjct: 210 MRQRESKDFAELLNRLRERNHTKEDIIKLK 239


>SB_3709| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 181

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = -2

Query: 397 TSFNYALLGN-QENANTVLQFVKNNIAAIRTAYIEDAPPTPVHTALSNLAAYLDESGLDE 221
           TS+  A+  N + N  T+L+    +   I T+Y ED  P      L ++A  LD+  LD 
Sbjct: 114 TSWPQAMAENIRNNDETILK----SCDKILTSYQEDLLPAESFMELCDVAGVLDQ--LDN 167

Query: 220 YETWLRSTQTNIPQ 179
            +T+L    + +PQ
Sbjct: 168 VDTFLSDIISGLPQ 181


>SB_18494| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1867

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 574  MREGDSSDFEYLLNRFRQSNFANDQL 497
            MR+ +S DF  LLNR R+ N   + +
Sbjct: 1317 MRQRESKDFAELLNRLREGNHTKEDI 1342


>SB_6452| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 342

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 353 HGSPVREEQYCCYKNGIH*RRSTNSSAYSFV*SRCLP 243
           HG  V  E    +++G+  R S NSS Y+F  + C+P
Sbjct: 33  HGDLVNLESLA-WQDGLRPRYSVNSSGYTFAYNPCVP 68


>SB_57295| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1320

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -2

Query: 244 LDESGLDEYETWLRSTQTNIPQYNSALSAINSARSNIAWGT 122
           +D   L +Y+   + T      Y+   SA+N AR   +WGT
Sbjct: 132 VDSFQLMDYDLLNKLTNIGSKDYHLMKSAVNEARQQRSWGT 172


>SB_35049| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 272

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 307 AYIEDAPPTPVHTALSNLAAYLDESGLDEYETWLRS 200
           A    +PP P     +N AA L +S LD++  W+ S
Sbjct: 38  ALTSTSPPPPPRRHFANRAANLIKSELDKFADWILS 73


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,999,771
Number of Sequences: 59808
Number of extensions: 419412
Number of successful extensions: 1772
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1772
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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