Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p13r
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U23516-2|AAG38882.1|  507|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U23516-1|AAL11101.1|  464|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z35663-12|CAA84736.2|  718|Caenorhabditis elegans Hypothetical p...    28   8.2  

>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 128 GHC*CRNVISCCTGQCNRSCDVCC 57
           G C CR    CC  +C   C  CC
Sbjct: 84  GCCCCRPKCCCCCRRCCTCCRTCC 107


>U23516-2|AAG38882.1|  507|Caenorhabditis elegans Hypothetical
           protein B0416.5a protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 639 NLSYDSWMHFVCPRLQANC-STVCLAILVVGGSLAAAS 749
           N  Y   +  +CP   +N  S VC A+++VGG   AA+
Sbjct: 277 NCLYTVMLELLCPSGYSNFFSGVCAALMIVGGVFGAAA 314


>U23516-1|AAL11101.1|  464|Caenorhabditis elegans Hypothetical
           protein B0416.5b protein.
          Length = 464

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 639 NLSYDSWMHFVCPRLQANC-STVCLAILVVGGSLAAAS 749
           N  Y   +  +CP   +N  S VC A+++VGG   AA+
Sbjct: 234 NCLYTVMLELLCPSGYSNFFSGVCAALMIVGGVFGAAA 271


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 128 GHC*CRNVISCCTGQCNRSCDVCC 57
           G C CR    CC  +C   C  CC
Sbjct: 85  GCCCCRPRCCCCCRRCCTCCRTCC 108


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 128 GHC*CRNVISCCTGQCNRSCDVCC 57
           G C CR    CC  +C   C  CC
Sbjct: 83  GCCCCRPRCCCCCRRCCTCCRTCC 106


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 128 GHC*CRNVISCCTGQCNRSCDVCC 57
           G C CR    CC  +C   C  CC
Sbjct: 84  GCCCCRPRCCCCCRRCCTCCRTCC 107


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 128 GHC*CRNVISCCTGQCNRSCDVCC 57
           G C CR    CC  +C   C  CC
Sbjct: 85  GCCCCRPRCCCCCRRCCTCCRTCC 108


>U46675-1|AAB52645.2|  524|Caenorhabditis elegans Hypothetical
           protein F35A5.4 protein.
          Length = 524

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 134 CLGHC*CRNVISCCTGQCNRSCDVCCIIGY 45
           C+  C    V S C  QC  SCD+ CI  Y
Sbjct: 310 CMPSCTSSCVQSMCPQQCYPSCDMNCIQQY 339


>Z35663-12|CAA84736.2|  718|Caenorhabditis elegans Hypothetical
           protein T04A8.15 protein.
          Length = 718

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/60 (21%), Positives = 27/60 (45%)
 Frame = -2

Query: 301 IEDAPPTPVHTALSNLAAYLDESGLDEYETWLRSTQTNIPQYNSALSAINSARSNIAWGT 122
           +ED P   VH+        +    +D ++ W     TN+P  ++ ++ I +  S   +G+
Sbjct: 404 MEDKPHESVHSTPQKPTTNVT---MDSFDEWSNQPSTNLPTTSNVITPIRNITSKAVFGS 460


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,463,620
Number of Sequences: 27780
Number of extensions: 308868
Number of successful extensions: 1042
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)