Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p13r
         (755 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g08660.1 68418.m01031 expressed protein contains Pfam domain ...    31   0.83 
At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy cha...    30   1.9  
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ...    29   3.3  
At1g58210.1 68414.m06610 kinase interacting family protein simil...    29   4.4  
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ...    28   5.8  
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ...    28   5.8  
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A...    28   7.7  
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    28   7.7  

>At5g08660.1 68418.m01031 expressed protein contains Pfam domain
           PF05003: protein of unknown function (DUF668)
          Length = 649

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 20/80 (25%), Positives = 35/80 (43%)
 Frame = -2

Query: 727 PTTSMARQTVLQFACNLGHTKCIQESYDKFREMRSGKWVSPQIRRNVYMTGMREGDSSDF 548
           P  +   Q +LQ A     T C+ +S D   E    +   P  + + Y  G+R   S+  
Sbjct: 547 PIVTDEEQKMLQEASKRKRTPCVSKSQDFDSEYSRARKCDPLSKSSEYFRGVRRSKSAAV 606

Query: 547 EYLLNRFRQSNFANDQLEML 488
           +   + F   +FA D+ ++L
Sbjct: 607 KRYSSGFPLLDFAIDKEKVL 626


>At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy
           chain-related similar to SP|Q61704 Inter-alpha-trypsin
           inhibitor heavy chain H3 precursor {Mus musculus};
           contains Pfam profile PF00092: von Willebrand factor
           type A domain
          Length = 754

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 101 SCCTGQCNRSCDVCCI 54
           SCC   CN+ C +CC+
Sbjct: 699 SCCVSLCNKCCCMCCV 714


>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
           strong similarity to plastidic fructose-bisphosphate
           aldolase (EC 4.1.2.13) from Nicotiana paniculata
           (NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
           [SP|Q40677]
          Length = 399

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 261 DKAVCTGVGGASSMYAVLIAAILFFTNWRTVLAFSWLPSRA*LKEVA 401
           D++ C G+ G +S  A        F  WRTV++    PS   +KE A
Sbjct: 160 DESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAA 206


>At1g58210.1 68414.m06610 kinase interacting family protein similar to
            kinase interacting protein 1 (GI:13936326) {Petunia
            integrifolia}
          Length = 1246

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = -2

Query: 334  KNNIAAIRTAYIEDAPPTPVHTALSNLAAYLDESGLDEYETWLR-STQTN-IPQYNSALS 161
            K+    ++ A ++D+P T + T    + A +D    +  E WLR ST  + I +Y + + 
Sbjct: 973  KSTEVRVKFADVDDSPRTKIPTVEDKVRADIDAVLEENLEFWLRFSTSVHQIQKYQTTVQ 1032

Query: 160  AINSARSNI 134
             + S  S +
Sbjct: 1033 DLKSELSKL 1041


>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
           strong similarity to plastidic fructose-bisphosphate
           aldolase (EC 4.1.2.13) from Nicotiana paniculata
           (NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
           [SP|Q40677]
          Length = 381

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 273 CTGVGGASSMYAVLIAAILFFTNWRTVLAFSWLPSRA*LKEVA 401
           C G+ G SS  A        F  WRTV++    PS   +KE A
Sbjct: 163 CQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAA 205


>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
           strong similarity to plastidic fructose-bisphosphate
           aldolase (EC 4.1.2.13) from Nicotiana paniculata
           (NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
           [SP|Q40677]
          Length = 398

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +3

Query: 273 CTGVGGASSMYAVLIAAILFFTNWRTVLAFSWLPSRA*LKEVA 401
           C G+ G SS  A        F  WRTV++    PS   +KE A
Sbjct: 163 CQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAA 205


>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
           Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
           thaliana]; similar to cytochrome P450 71A4, Solanum
           melongena, PIR2:S36805
          Length = 497

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 264 KAVCTGVGGASSMYAVLIAAILFFTNWR 347
           K +C G+G  S++  V +A I+   NWR
Sbjct: 437 KRICPGIGFTSALIGVTLANIVKRFNWR 464


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 264 KAVCTGVGGASSMYAVLIAAILFFTNWR 347
           K +C G+G  S++  V +A I+   NWR
Sbjct: 430 KRICPGIGFTSALIGVTLANIVKRFNWR 457


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,365,155
Number of Sequences: 28952
Number of extensions: 275765
Number of successful extensions: 774
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)