Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p13f
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    29   0.024
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    26   0.30 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   3.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.7  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   4.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 29.5 bits (63), Expect = 0.024
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +1

Query: 319 IVLHSNVDSINAVSVLTEGGAPFPVNTREPFTLEPQYHFLKINLNE 456
           +V    + + +A  +L EGG P   + R+P+    +YH   ++L E
Sbjct: 825 VVPRKEIPAKSAEQILAEGGCPNLYDARKPYVNGSEYHPSIVSLGE 870


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 324 NNLSHAFCYCLYNDGLSTIITEG 256
           N +  AFCYC Y+  +  I T G
Sbjct: 547 NTIVFAFCYCYYSISIRPISTLG 569



 Score = 24.2 bits (50), Expect = 0.92
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 324 NNLSHAFCYCLYNDGLS 274
           N +  +FCYC YN  ++
Sbjct: 266 NTIVFSFCYCYYNSKMT 282


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 50  ICPSFYYCV 76
           IC  FYYCV
Sbjct: 121 ICDKFYYCV 129


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 261 EGPVCSFSEVQI*INIVFQW 202
           EG VCS  E+ +  N  F W
Sbjct: 195 EGLVCSIKELNMIFNEFFGW 214


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 400 REPFTLEPQYHFLKINLNEPLVVGQKYSL 486
           +E   L P  HF+   L + L+    Y+L
Sbjct: 53  KETLRLYPSVHFISRTLGQDLITTGGYTL 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,249
Number of Sequences: 336
Number of extensions: 3702
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)