Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p13f
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    31   0.023
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   0.86 
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    25   1.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   3.5  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   4.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.1  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 31.5 bits (68), Expect = 0.023
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +1

Query: 274  RETIIIEAVAEGVTQIVLHSNVDSINAVSVLTEGGAPFPVNTREPFTLEPQYHFLKINLN 453
            R+TI+++A  E +   +L  ++D I       +GG+ +   +R         H LK NL+
Sbjct: 936  RQTILMQAKMESIEIPLLQGSMDDIGQQEYAADGGSAYERESRIEIDYSKLEHHLK-NLS 994

Query: 454  EP 459
            +P
Sbjct: 995  DP 996


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 26.2 bits (55), Expect = 0.86
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
 Frame = -2

Query: 564 IVVDVPSPPNTPLHWAFVHCARI-------FNIQRVFLSNNKGFVQINF*EMILRLQCER 406
           I+ DV  PP     WAF  C  +         IQRV+ S  +G V      ++  + C  
Sbjct: 45  ILSDVLRPPENNGRWAFSSCKAVAVVAVGELPIQRVWCSEAQGLVAAQIGGVVF-ISCYA 103

Query: 405 LPCIN 391
            P +N
Sbjct: 104 PPSLN 108


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 139 PITDNTTRSIEQVYRLPETVKPLEYDI 219
           PIT   TR +E+ YR+P+T K L+  I
Sbjct: 370 PIT-TLTRRVEKDYRVPDTDKVLQEGI 395


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +3

Query: 45  CKYVQAFTTVFGDFRPNIG*PPSMAQRFRTN 137
           CK V         F PNIG P S  +R   N
Sbjct: 787 CKKVMKAINALAAFTPNIGGPCSSIRRLHAN 817


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +1

Query: 256 PFSYDGRETIIIEAVAEGVTQIVLHSNVDSINAVSVLTE 372
           P  Y G +T+ + +    +  IVL++N D    V+++T+
Sbjct: 89  PDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTK 127


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 422 GSSVKGSLVLTGNGAPPSV 366
           GSS K  L+L GNG PP V
Sbjct: 448 GSS-KSLLLLNGNGPPPPV 465


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +1

Query: 226 DLYFAERTDRPFSYDGRETIIIEAVAEGVTQIVLHSNVDSINAVSV 363
           D+Y     +  ++YD  +++ + A +    Q VL S V  I A  +
Sbjct: 57  DIYRPPANNGRWAYDAAKSVAVVATSSYPIQRVLRSAVPGIVAAQI 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,229
Number of Sequences: 2352
Number of extensions: 15130
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)