Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p11f
         (351 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical ...    55   1e-08
L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical pr...    46   1e-05
L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical pr...    46   1e-05
AL023835-14|CAA19489.2|  192|Caenorhabditis elegans Hypothetical...    27   3.8  
Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical pr...    26   6.6  
AL110477-6|CAB54330.1|  265|Caenorhabditis elegans Hypothetical ...    26   6.6  
Z81586-7|CAB04693.1|  359|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>AF016427-2|AAB65352.1|   54|Caenorhabditis elegans Hypothetical
           protein F32D1.2 protein.
          Length = 54

 Score = 55.2 bits (127), Expect = 1e-08
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +2

Query: 77  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 229
           M AWR AGL Y+ YS IAA++ R+  KQ     A+K+ E+ +++T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAEITRKCTKQVGGKAAVKKPEATLKITTWENGK 51


>L23647-8|AAK29993.1|   54|Caenorhabditis elegans Hypothetical
           protein ZC262.5 protein.
          Length = 54

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +2

Query: 77  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 229
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAWENGK 48


>L07144-2|AAK21439.1|   54|Caenorhabditis elegans Hypothetical
           protein R05D3.6 protein.
          Length = 54

 Score = 45.6 bits (103), Expect = 1e-05
 Identities = 21/51 (41%), Positives = 32/51 (62%)
 Frame = +2

Query: 77  MSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDESHVRVTPWANGR 229
           M AWR AGL Y+ YS IAA+V+R+  K       +K+ ++ ++ T W NG+
Sbjct: 1   MVAWRAAGLNYVRYSQIAAQVVRQCTK---GGANVKKPQATLKTTAWENGK 48


>AL023835-14|CAA19489.2|  192|Caenorhabditis elegans Hypothetical
           protein Y37A1B.4 protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 192 NLTSESHLGPTDDLHTSRKLFQSEEGIV 275
           N+  + H G +D +H  RKL    EG++
Sbjct: 162 NILPQKHQGASDVVHGRRKLMDDLEGVI 189


>Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical
           protein F09B9.1 protein.
          Length = 710

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -2

Query: 290 SCMLVNYSFF-TLEQLSGGVQVVRWPKV*L*REIRHVSTPLLEILALVTCEAPWLRCLSS 114
           S +++ Y FF T  +    V  V W    + R +R ++ P++  +   T  AP+++   S
Sbjct: 316 SGLVLTYMFFKTTPKKKMIVNPVTWIMFYVHRYLR-LTPPIMLFIGFFTVYAPYIQGPFS 374

Query: 113 LCKLNQLASKRSFC 72
             ++NQL  +   C
Sbjct: 375 ASQMNQLVMEADEC 388


>AL110477-6|CAB54330.1|  265|Caenorhabditis elegans Hypothetical
           protein Y113G7B.8 protein.
          Length = 265

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +2

Query: 26  ENFNLFLRIKVNKNNNKMSAWRQAGLTYINYSNIAAKVLRRSLKQEFRAEALKRDE 193
           E++NLFLR+  + +N  +          ++YSN     +R   K +    ++K D+
Sbjct: 199 EDYNLFLRLWAHGSNPALKLLTHKIFKNLDYSNQPGNAVRTIYKWDGTEASVKFDD 254


>Z81586-7|CAB04693.1|  359|Caenorhabditis elegans Hypothetical
           protein T05F1.9 protein.
          Length = 359

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 26  ENFNLFLRIKVNKNNNKMSAWRQAGL 103
           EN+  F++I + +N N+ S W   GL
Sbjct: 41  ENYYDFVKINLARNGNEFSVWMIYGL 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,990,041
Number of Sequences: 27780
Number of extensions: 151590
Number of successful extensions: 378
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)