Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10p06f
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176 31 0.61
10_01_0044 - 583349-584044 31 0.81
05_03_0458 + 14280953-14281866,14281964-14282912 31 0.81
12_02_0674 - 21745321-21746223,21746229-21747608 31 1.1
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 31 1.1
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 31 1.1
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 31 1.1
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 31 1.1
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 31 1.1
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 31 1.1
02_04_0199 - 20861793-20862023,20862588-20862798,20863260-208641... 31 1.1
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192... 31 1.1
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 31 1.1
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334 30 1.4
01_02_0111 - 11220179-11220322,11220430-11220497,11220611-112206... 30 1.4
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416... 29 2.5
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 29 3.3
01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,138... 29 3.3
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 29 4.3
02_05_0897 + 32603060-32603387,32604348-32604589,32604681-326048... 29 4.3
12_02_1175 + 26702744-26704507 28 5.7
01_01_0556 + 4090432-4090500,4091414-4092030,4092408-4092533,409... 28 5.7
10_06_0012 - 9586478-9588880 28 7.6
07_01_0452 - 3418572-3418763,3419140-3419223 28 7.6
>06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176
Length = 427
Score = 31.5 bits (68), Expect = 0.61
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 158 LVDLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIV 337
L D +E + +L+S++ NN N N++ N N NS N Y G + + +
Sbjct: 165 LGDKDEEVDSWLLLSKDSDNNN----NNNNNNDNDNNDNNNSNSSNNGMYFGEVDEYFDL 220
Query: 338 HGWNS 352
G+NS
Sbjct: 221 VGYNS 225
>10_01_0044 - 583349-584044
Length = 231
Score = 31.1 bits (67), Expect = 0.81
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Frame = -2
Query: 532 SVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADH--GVH--S 365
+VV + +V ++ TG+S DG + +G + N G Q+ DH GVH
Sbjct: 71 TVVQKYQVRVVADVPGTGSSKDGEMKQALGGSAQPSNKGATNGSAQENQGDHSQGVHGVQ 130
Query: 364 GVSVAVP---AVDNNKERQVSIVVRVPDRVDIAICN 266
G P +++ + DRVD A+ N
Sbjct: 131 GDGTQGPRGGSLNQDGSASQEFFNNFQDRVDYAVHN 166
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = -3
Query: 576 PKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETA 397
P L P++ T P LPP L + P P+ T +A P+ PR +++ + T+
Sbjct: 66 PPLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRSASSSKCSAPTS 125
Query: 396 SK 391
++
Sbjct: 126 AQ 127
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 618 CHQPVVQRLPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTP 472
C LP++ P K I T P L PP L+S ++ P P + P
Sbjct: 397 CRTNTCSALPSSSKPAPKKITPTPPTLAPPPLISPKEETPSPSPYIEPP 445
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>10_08_0848 +
21035446-21035461,21035742-21036233,21036400-21036956,
21037084-21037539,21037886-21038302
Length = 645
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>05_03_0187 +
9413575-9414895,9415014-9415289,9415513-9415631,
9415749-9416192
Length = 719
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 39 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 73
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 182 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 216
>02_04_0199 -
20861793-20862023,20862588-20862798,20863260-20864142,
20864363-20865608
Length = 856
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -3
Query: 618 CHQPVVQRLPTTCAPKLKPIKW--TRPQLPP-PLLMSQTKKLPRNCPTLGTPLTAVLYR- 451
CH P+ + A + P + RP LPP P L+S T P P +GTP + R
Sbjct: 443 CHPPL-PTVAAAAAAGMPPRRRRRVRPPLPPSPPLLSSTTATPPPTPPVGTPKSEAADRR 501
Query: 450 -PLARPR 433
P AR R
Sbjct: 502 PPPARRR 508
>01_06_0544 +
30118208-30118417,30118959-30119063,30119179-30119260,
30119415-30121250,30121327-30121445,30121563-30122006
Length = 931
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 162 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 196
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
Length = 554
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +3
Query: 405 PTATLLLWT--GVVLPTVYTTLPSMEFPV---SDSSLAT----FWSGSSTTEAAIGVEST 557
P +T+L+WT G ++ VYTT+P P+ +++++AT S + TEA G+ +T
Sbjct: 19 PASTMLVWTQVGEIVFPVYTTMPISTCPLMTGNENAVATNRDDSMSKDTPTEAKNGISTT 78
>01_02_0111 -
11220179-11220322,11220430-11220497,11220611-11220644,
11220735-11220766,11220900-11220959,11221276-11221729
Length = 263
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -3
Query: 597 RLPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQST-- 424
R PT A +P+ +T P+ PPP + ++ P P T + A L + R S+
Sbjct: 39 RAPTHVALLPRPL-YTNPRQPPPSRLHRSPPHPPPPPLRRTHVAARLVERVRRRMSSSRL 97
Query: 423 -TITLQSETASKAGRIMV 373
T TL+ E AS R +V
Sbjct: 98 DTWTLKEEVASMDKRWLV 115
>03_02_0693 -
10441253-10441294,10441404-10441511,10441594-10441677,
10441765-10443062,10443111-10444804,10444890-10444957,
10445057-10445186,10445292-10445415,10445551-10445711,
10446714-10446868
Length = 1287
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -2
Query: 592 TDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHN--- 422
T+ + Q ++ + S+PI++ D+P Q L+D +++ G++ + T V +
Sbjct: 736 TEYIEEQVVSDDLISSPISSKQSDDPCQMAPLTLTDADDALAGTITESNVSTVVVESATT 795
Query: 421 NNVAVGDGQQ 392
N+VAV +Q
Sbjct: 796 NDVAVQYNEQ 805
>04_04_1197 +
31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 210 VQTTNTGFSPDVTKTTIKLLQMAMSTLSGTRTTMETC 320
VQ +GF K+ KL+Q+++S L RT E C
Sbjct: 845 VQNNLSGFEVTQLKSMNKLVQLSVSQLENVRTQEEAC 881
>01_01_0161 -
1385408-1385566,1385815-1385943,1386164-1386322,
1387228-1387571,1387641-1387905,1387998-1388075,
1388207-1388260,1389341-1389361,1389453-1389578,
1389696-1389863,1389923-1390313,1390629-1390710,
1391175-1391536,1391806-1392630,1392956-1393476
Length = 1227
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 435 VVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVES 554
VV PT YT S E+P ++ T+W + A + V+S
Sbjct: 796 VVDPTAYTIGRSAEWPEDGPTMGTYWCRRGRSYAHVQVDS 835
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 337 PRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWS 477
P L +Q E +P R+ R + ++ C L W+ S+Q +WS
Sbjct: 812 PTLGEQPAQPTESAEPNRIIPRPKERQDCNQLTWTTAPSLQFLNRWS 858
>02_05_0897 +
32603060-32603387,32604348-32604589,32604681-32604824,
32604889-32605050,32605129-32605212,32605528-32605601,
32605850-32606039,32606120-32606275,32606368-32606465,
32606976-32607102,32607193-32607292,32607402-32607572,
32607790-32607838,32607912-32608003,32608705-32608774,
32608999-32609023,32609059-32609293,32609425-32609525,
32609614-32609865
Length = 899
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +3
Query: 456 TTLPSMEF-PVSDSSLATFWSGSSTTEAAIGVEST*LASAWARTLSVXAGRQAGGRPNRV 632
T +PS + P+S LA W T E+ S WA T V G +G P+
Sbjct: 682 TPMPSRAWAPMSPPRLALGWQSMPGTPVPQPHEAPTPGSGWAVTPGVSFGDASGKNPSSY 741
Query: 633 TGXDPAG 653
P+G
Sbjct: 742 ATPTPSG 748
>12_02_1175 + 26702744-26704507
Length = 587
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 537 PPPLLMSQTKKLPRNCP-TLGTPLTAVLYRPLARPRQSTTITLQSETASK 391
PPPL +S + K P + P T L +L+ PL PR+ T + + SK
Sbjct: 313 PPPLPVSSSSK-PTSAPRTFARRLVDLLHSPLYLPRRLTIPDIAAHRWSK 361
>01_01_0556 +
4090432-4090500,4091414-4092030,4092408-4092533,
4092619-4092895,4093021-4093251
Length = 439
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 224 YWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHG---WNSNGNSAVNTMIRPAL 394
YW F RN+ N + + V+S R+ + + HG +S N V + P +
Sbjct: 171 YWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSGNNGGVARIASPRV 230
Query: 395 LAVSDCNVIVVD 430
A+ C + +D
Sbjct: 231 YALVACFKLALD 242
>10_06_0012 - 9586478-9588880
Length = 800
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 344 WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 472
W++NG + V P L SD N++++D + N +++T VN
Sbjct: 78 WSANGENPVVDPASPELAISSDGNMVILD-QVTKNIIWSTHVN 119
>07_01_0452 - 3418572-3418763,3419140-3419223
Length = 91
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3
Query: 507 KLPRNCPTLGTPL---TAVLYRPLARPRQSTTITLQSET 400
KL NCPT G P T L +PL R + T L S T
Sbjct: 42 KLKINCPTTGLPSVDHTNHLIKPLGCARDANTTALYSTT 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,816,521
Number of Sequences: 37544
Number of extensions: 496349
Number of successful extensions: 1888
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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