Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10p06f
(659 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 33 0.22
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 32 0.39
At5g15860.2 68418.m01856 expressed protein 31 0.90
At5g15860.1 68418.m01855 expressed protein 31 0.90
At2g37925.1 68415.m04655 copper transporter family protein simil... 31 0.90
At2g33550.1 68415.m04112 gt-2-related weak similarity to gt-2 (G... 31 0.90
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 30 1.6
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 29 2.1
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 2.7
At3g48050.2 68416.m05239 bromo-adjacent homology (BAH) domain-co... 29 2.7
At3g48050.1 68416.m05238 bromo-adjacent homology (BAH) domain-co... 29 2.7
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 29 2.7
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 29 2.7
At1g07440.1 68414.m00794 tropinone reductase, putative / tropine... 29 3.6
At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein si... 28 4.8
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 4.8
At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger) fa... 28 6.3
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 28 6.3
At3g25870.1 68416.m03223 expressed protein 28 6.3
At1g26390.1 68414.m03219 FAD-binding domain-containing protein s... 28 6.3
At1g10620.1 68414.m01204 protein kinase family protein contains ... 28 6.3
At4g21585.1 68417.m03124 bifunctional nuclease, putative similar... 27 8.4
At3g55160.1 68416.m06126 expressed protein 27 8.4
At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138... 27 8.4
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 27 8.4
At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containi... 27 8.4
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 591 PTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPL-TAVLYRPLARPRQSTTIT 415
P P L P +T+P LPPP N PTL P+ T +Y+P P T T
Sbjct: 63 PPVHKPTLSPPVYTKPTLPPPAYTPPV----YNKPTLPAPVYTPPVYKPTLSPPVYTKPT 118
Query: 414 L 412
L
Sbjct: 119 L 119
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = -3
Query: 594 LPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTIT 415
LP P L P +T+P L P + N P+L P +Y+P P T T
Sbjct: 120 LPPVFKPTLSPPVYTKPTLSPTVYKPTLSPPVNNKPSLSPP----VYKPTLSPPVYTKPT 175
Query: 414 LQSETASKA 388
L K+
Sbjct: 176 LPPPVYKKS 184
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -2
Query: 652 PAGSXPVTLLGLPPACRPAXTDNVRAQAEANQVDSTPIAASVVDEPDQKVAKELSD 485
P PV+ PP P + V A ++ V S P+ A V D P VA ++D
Sbjct: 70 PKSPAPVSESSPPPTPVPESSPPVPAPMVSSPVSSPPVPAPVADSPPAPVAAPVAD 125
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 30.7 bits (66), Expect = 0.90
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 299 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 472
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 473 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHV 586
F+ N I+ GG+ R++L+G S GAH+
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAHI 240
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 30.7 bits (66), Expect = 0.90
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 299 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 472
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 473 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHV 586
F+ N I+ GG+ R++L+G S GAH+
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAHI 240
>At2g37925.1 68415.m04655 copper transporter family protein similar
to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis
thaliana}; contains Pfam profile PF04145: Ctr copper
transporter family; supporting cDNA
gi|18496855|gb|AF466372.1|
Length = 145
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 329 VIVHGWNSNGNSAVNTMIRPALLAVS-----DCNVIVVDWRGLANGLYNTAV 469
V+V WN+ + T RP+LL + +C V+ W G G+Y A+
Sbjct: 8 VVVEAWNTTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALAL 59
>At2g33550.1 68415.m04112 gt-2-related weak similarity to gt-2
(GI:20249) [Oryza sativa]
Length = 314
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 637 PVTLLGLPPACRPAXTDNVRAQAEANQVDSTPIAASVVDEPDQK 506
PV LGL PA ++ + +++STP+A SV D D++
Sbjct: 159 PVLSLGLAPASDEGLLSDLDRRESPEKLNSTPVAKSVTDVIDKE 202
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -3
Query: 591 PTTCAPKLKPIKWTRPQLPPPLLMSQT-KKLP-RNCPTLGTPL-TAVLYRPLARP 436
P P L P +T+P +PPP+ K P PT+ P+ T +Y+P P
Sbjct: 97 PPVYKPTLSPPVYTKPTIPPPVYTPPVYKPTPVYTKPTIPPPVYTPPVYKPTPSP 151
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -3
Query: 591 PTTCAPKLKPIKWTRPQLPPPL----LMSQTKKLP-RNCPTLGTPL-TAVLYRPLARPRQ 430
P P L P +T+P +PPP+ + T P PT+ P+ T +Y+P P
Sbjct: 49 PPVYKPTLSPPVYTKPTIPPPVYTPPVYKHTPSPPVYTKPTIPPPVYTPPVYKPTLSPPV 108
Query: 429 STTITL 412
T T+
Sbjct: 109 YTKPTI 114
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +2
Query: 395 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 574
L+ D V +D+R G + V S F+ N + GG+ R++L+G S
Sbjct: 232 LSERDIIVACIDYRNFPQGSISDMVKDASSGISFVCNHIA----EYGGDPDRIYLMGQSA 287
Query: 575 GAHV 586
GAH+
Sbjct: 288 GAHI 291
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = -3
Query: 609 PVVQRLPTTCAPKLKPIKW--TRPQLP--PPLLMSQTKKLPRNCPTLGTPLTAV 460
P + LPT P L PI T P LP PP+ + LP P+ PL V
Sbjct: 311 PTIPLLPTPPTPTLPPIPTIPTLPPLPVLPPVPIVNPPSLPPPPPSFPVPLPPV 364
>At3g48050.2 68416.m05239 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 586 NVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
N+ A A+++ +P+A+ V +P V E S GN+
Sbjct: 776 NLLASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g48050.1 68416.m05238 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 586 NVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
N+ A A+++ +P+A+ V +P V E S GN+
Sbjct: 776 NLLASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +2
Query: 362 SAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLV-----WLIN 526
SA+N+++ A +AV+ V+ W+ LA ++ VP V +F+G F + WL
Sbjct: 181 SAINSLVMCASVAVTYLLGSVISWQKLA------LISTVPCVFEFVGLFFIPESPRWLSR 234
Query: 527 NG 532
NG
Sbjct: 235 NG 236
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 395 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 574
LA D V +D+R G + V+ F+ N I+ GG+ R++L+G S
Sbjct: 176 LAERDIIVACLDYRNFPQGTISDMVSDAAQGISFVCNN----ISAFGGDPNRIYLMGQSA 231
Query: 575 GAHV 586
GAH+
Sbjct: 232 GAHI 235
>At1g07440.1 68414.m00794 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 266
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 610 ACRPAXTDNVRAQAEANQVDSTPIAASVVDEPDQKV 503
AC A +D +RA A A V +TP+A +V D+ +KV
Sbjct: 179 ACEWA-SDGIRANAVAPAVIATPLAEAVYDDEFKKV 213
>At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase, basic
vacuolar isoform precursor SP:P52407 from [Hevea
brasiliensis]
Length = 306
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 227 WLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 373
W +R QN + + +++ S G+LP+ V GW SNG +A +
Sbjct: 222 WDGSRGYQNLFDALLDVVYSAVERSG-GGSLPVVVSESGWPSNGGNAAS 269
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 200 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 373
+ NG NN N NN NGN N+ N+N N N +G N+NGN+ N
Sbjct: 87 NNNGNNNN----DNNNGNNKDNNNNGNNNNGNNNNGNDN-------NGNNNNGNNNDN 133
>At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 27.9 bits (59), Expect = 6.3
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -3
Query: 648 PDPNR*PCWVCHQPVVQRLPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPT---LG 478
P PN PC +C R P C P+ T + L S T L RN P L
Sbjct: 87 PRPNNGPCSICLCDYEAREPVRCIPECNHCFHT-DCVDEWLRTSATCPLCRNSPAPSRLA 145
Query: 477 TPLTAVLYRPLA 442
TPL+ ++ PLA
Sbjct: 146 TPLSDLV--PLA 155
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 586 NVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
N+ A A+++ +P+A+ V +P + E S GN+
Sbjct: 776 NLLASVAADEMSKSPVASPSVSQPPNSLMNENSTVGNN 813
>At3g25870.1 68416.m03223 expressed protein
Length = 170
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 658 LGPAGSXPVTLLGLPPACRPAXTDNVRAQAEANQV 554
L P + P TLL PP+C T+ VRA +++++V
Sbjct: 91 LPPPLTPPQTLL--PPSCEETVTELVRASSDSSEV 123
>At1g26390.1 68414.m03219 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 530
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 13 QHEAPTSAGWLNSIVFWQCYP 75
+HE WLNS +FW YP
Sbjct: 330 KHEDCQEMSWLNSTLFWADYP 350
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -3
Query: 612 QPVVQRLPTTCAPKLKPIKWTRPQLPPPLLM---SQTKKLPRNCPTLGTPLTAVLYRPLA 442
QP Q PT +P + P + +PQLPPP L S +LP P L + P++
Sbjct: 100 QPPPQSTPTGDSPVVIP--FPKPQLPPPSLFPPPSLVNQLPDPRPNDNNILEPI-NNPIS 156
Query: 441 RPRQSTT 421
P +T
Sbjct: 157 LPSPPST 163
>At4g21585.1 68417.m03124 bifunctional nuclease, putative similar to
bifunctional nuclease [Zinnia elegans]
gi|4099833|gb|AAD00694
Length = 299
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 164 DLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFV 331
D+ +P L G N + RR N H V N + S + YN +LPL +
Sbjct: 151 DIHQPLHVGFL-GDEGGNTITVRWYRRKTNLHHVWDNMIIESALKTYYNKSLPLMI 205
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 27.5 bits (58), Expect = 8.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 40 WLNSIVFWQCYPHDPWRQQ 96
WL+S ++ CYP P+R++
Sbjct: 762 WLSSFLYLSCYPSAPYRRK 780
>At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 579
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -3
Query: 525 LMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGRIMVFTAEFPLLF 346
+ S +KL CP +T +L R L PR + E + T+EFP L+
Sbjct: 397 MTSNERKLAGLCPLNAKEVTRLL-RALGAPRDARIYWAGGEPLGGKEALKPLTSEFPHLY 455
Query: 345 QPWTI 331
+ I
Sbjct: 456 NKYDI 460
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 607 CRPAXTD-NVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNSIDGS 461
CRP T A+AEA Q A EP+Q + E +T N +GS
Sbjct: 781 CRPIMTKPKPVAKAEAPQAKGGEQADEGKSEPEQPASAEPMETENPAEGS 830
>At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -2
Query: 286 VDIAICNNLMVVLV---TSGEKPVLVVCTVP*HKDVFLGRFFQVNEVRNTLAIRHPNVSA 116
VD+ + + VL + G P +V+C + H LGRF + +V +L R
Sbjct: 423 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 482
Query: 115 YTF 107
YTF
Sbjct: 483 YTF 485
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,819,887
Number of Sequences: 28952
Number of extensions: 363101
Number of successful extensions: 1456
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -