Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p05f
         (648 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.7  
SB_40143| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-09)                 28   5.7  

>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1488

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = -2

Query: 149 LKTRALLVELGSATSLVDTATTAVNTNKRANFILQNRSELKFRLKS 12
           L TRA +V L  +T+++  ATT V  +K  + ++    ELK +++S
Sbjct: 625 LATRAPIVSLSKSTNIISKATTFVAVDKSTHEVIA-VPELKAQVES 669


>SB_40143| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-09)
          Length = 334

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -2

Query: 185 RNSLSFEAIVPMLKTRALLVELGSATSLVDTATTAVNTNKRANFILQN 42
           +N   F+A +P L    L   +G+  SLV    T     +R+N++L N
Sbjct: 15  KNEGVFKAAIPCLTVLGLWAIIGNTISLVVLLKTKSLRRRRSNYLLVN 62


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,440,761
Number of Sequences: 59808
Number of extensions: 397109
Number of successful extensions: 879
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)