Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10p05f
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g53290.1 68414.m06040 galactosyltransferase family protein co... 30 1.2
At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containi... 30 1.2
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 30 1.5
At5g64360.3 68418.m08085 DNAJ heat shock N-terminal domain-conta... 29 2.0
At5g64360.2 68418.m08084 DNAJ heat shock N-terminal domain-conta... 29 2.0
At5g64360.1 68418.m08083 DNAJ heat shock N-terminal domain-conta... 29 2.0
At5g45720.1 68418.m05621 hypothetical protein 29 2.7
At2g26100.1 68415.m03132 galactosyltransferase family protein co... 29 3.5
At3g11880.1 68416.m01456 expressed protein 28 4.7
At3g14960.1 68416.m01892 galactosyltransferase family protein co... 28 6.1
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 27 8.1
At5g24280.1 68418.m02856 expressed protein ; expression supporte... 27 8.1
At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD fin... 27 8.1
>At1g53290.1 68414.m06040 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
;contains similarity to Avr9 elicitor response protein
GI:4138265 from [Nicotiana tabacum]
Length = 345
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 276 PSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 368
P + SV V D P+C G C E R +HK
Sbjct: 300 PECSPSSVAVWDIPKCSGLCNPEKRMLELHK 330
>At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 798
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 279 SPASGSVTVRD--CPRCGGRCRLEHRHSSVHK 368
S SGS+ + C +CG RC +E+ H+ V+K
Sbjct: 620 SKPSGSLHIEPEICLKCGSRCDIENSHAEVNK 651
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 325 PQRGQSRTVTLPLAGLGWP*CAYCWVLY 242
P+ G +RT + P W C YC+VLY
Sbjct: 629 PKSGAARTDSEPEVSSFWTTCPYCYVLY 656
>At5g64360.3 68418.m08085 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 328 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 242
PP R QS+ T P+A W C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206
>At5g64360.2 68418.m08084 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 328 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 242
PP R QS+ T P+A W C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206
>At5g64360.1 68418.m08083 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 422
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 328 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 242
PP R QS+ T P+A W C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206
>At5g45720.1 68418.m05621 hypothetical protein
Length = 900
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 340 WNTVTLRFINSPRRGFNFNVQIWGCFG*SVHPSKRKHIVFSHCASVQFPKIFEIDLI 510
WNT++ +PRR V + C V P HI+ S C FPK+ ++D+I
Sbjct: 472 WNTLSKIVDRAPRRV----VFVLVCSSLDVLP----HIIVSRCQKFFFPKLKDVDII 520
>At2g26100.1 68415.m03132 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 371
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 273 HPSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 368
H SP S + V D P+C G C E R +HK
Sbjct: 325 HCSPKS--IAVWDIPKCSGLCDPESRLKELHK 354
>At3g11880.1 68416.m01456 expressed protein
Length = 443
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 206 PRVTEKLRNSLSFEAIVPMLKTRALLVELGS 114
P +E+++ + FEAI P+LK AL E GS
Sbjct: 260 PASSERVKATERFEAIYPLLKEVALACEPGS 290
>At3g14960.1 68416.m01892 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 343
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 276 PSPASGSVTVRDCPRCGGRCRLEHRHSSVHKL 371
P + S+ V D P+C G C E R +H L
Sbjct: 298 PECSPYSIAVWDIPKCSGLCNPEKRMLELHML 329
>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 724
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 201 PWCDSYLADCRLEVYST 251
PW S L DC+ EVY+T
Sbjct: 398 PWSVSILPDCKTEVYNT 414
>At5g24280.1 68418.m02856 expressed protein ; expression supported by
MPSS
Length = 1634
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 152 MLKTRALLVELGSATSLVDTATTAVNTNKRANFILQNRSELKFRLK 15
+L R+ + L S TSL+D A + ++ N + R EL+ RLK
Sbjct: 1271 VLAIRSSSLALSSETSLMDMAQYTEDLKEKINIDEERRVELEERLK 1316
>At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD finger
protein-related contains Pfam profiles PF03107: DC1
domain, weak hit to PF00628: PHD-finger
Length = 513
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 207 CDSYLADCRLEVYS---TQQYAHQGHPSPASGSVTVRDCPRCGGRCRLEHRHSSVHKL 371
CD DC L+V ++ + +QGHP P ++ ++ P C C + + VHKL
Sbjct: 323 CDKEGCDCVLDVVCASVSEPFDYQGHPHPLFLALDPKEKPIC-NIC----KSTKVHKL 375
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,703,352
Number of Sequences: 28952
Number of extensions: 259150
Number of successful extensions: 602
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -