Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p02r
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.4  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   6.0  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 223 FILMYLIYLYETYYFTIS 170
           F+  Y IYL+  YY   S
Sbjct: 145 FVFCYFIYLFTVYYIYYS 162


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = -1

Query: 234 FKLNLYLCT*FTY--TKLIILRFLKFQ*ICNLTFYGRLNKL*MKCKYVSYFNLDKRKPQR 61
           + L LY+     Y  TKL+++ FLKF  I  +  +G +  +   C  +S  NL +R P  
Sbjct: 270 YVLILYILESLLYMVTKLVVVTFLKF--IKKIQIFGIM--ITKAC--MSASNLIQRTP-- 321

Query: 60  NVNFNLILNV 31
           N+ + L+ N+
Sbjct: 322 NICYKLLSNL 331


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 247 KYFHPTSSEVVAYLFFNYLFY 309
           K+FHP +      + FNY +Y
Sbjct: 47  KHFHPLALSNKNAIDFNYYYY 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,024
Number of Sequences: 336
Number of extensions: 3105
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)