Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10p02f
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    29   0.033
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   6.6  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.7  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 29.1 bits (62), Expect = 0.033
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = +1

Query: 97  KCIKYMLLCITAIFVLTSALTISV--GTTIYAIYHDISFFLSPYAFSPAIFVIAIGVIML 270
           + +KY ++ I  + +LTS++T+ V   + +YA  H   FF     F   I +I + ++ +
Sbjct: 39  RILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIFFFFAICCDF---IALIVVNIVHV 95

Query: 271 F 273
           F
Sbjct: 96  F 96


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +2

Query: 383 LPTVFAARSHNFWTKNLGKHFLYTTSMLRRR 475
           +  V+   ++NFW K     FL    +L+ R
Sbjct: 63  ISNVYQILAYNFWKKKYWSEFLANLKLLKGR 93


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 137 KIAVIHNSMYLMHFI 93
           K+A  HNS+Y +H +
Sbjct: 242 KVAKDHNSLYSLHLL 256


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 421  DKKLREALPLYYQHAEAQDAFDFIQYELN 507
            DK+     PLYY   +  D F+   + LN
Sbjct: 2520 DKQTGHVAPLYYYPGDVYDYFN-ANFSLN 2547


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -3

Query: 129 CYTQQHVFNALHPQLLLLSHFCNVLMYYNNNIRLFRMRIT 10
           CY + H F      L++ S  C VL  Y  N+R    RIT
Sbjct: 38  CYGR-HFFKK---NLIVGSENCLVLNVYTKNLRTDTNRIT 73


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 238 IFVIAIGVIMLFVSLFGCIGALKESTCLVNIFAVILSIVFILEIAAAI 381
           IF+    V+ L  SL   + A K+       FA+I   VF+  + + I
Sbjct: 179 IFLFGRIVLQLLSSLGFLLYASKKQFTFEETFAIIHLSVFVYTLVSVI 226


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 94  MKCIKYMLLCITAIFVLTSALTISVGTTI 180
           +K +   LLC   IF+      +S+ TT+
Sbjct: 68  LKSVYASLLCTEKIFLFAIYTNLSILTTV 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,917
Number of Sequences: 336
Number of extensions: 3425
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)