Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o21f
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 29 3.9
AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl ... 29 3.9
Z46676-1|CAA86661.1| 799|Caenorhabditis elegans Hypothetical pr... 28 5.1
X16473-1|CAA34493.1| 799|Caenorhabditis elegans zyg-11 protein ... 28 5.1
AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine r... 28 5.1
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 6.8
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 6.8
Z83236-6|CAB05783.1| 132|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 27 9.0
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 9.0
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 114 TESGPSTTADVIMLNDRNVATVSGDVAS-IQTSQFNATE---GPRDVETNASNAQKSEKD 281
T TT V + +TVSGD S TS+F TE GP + S++++S+ D
Sbjct: 243 TTESDGTTTTVFTTTKDDTSTVSGDSNSGSSTSEFKNTETTTGPGSTVSEPSSSERSDLD 302
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical protein
F22B5.7 protein.
Length = 1415
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 418 TFPPKTATVPLLTSGIFQGCCGKPDGPTIRSAQQLSILYDWSLSSTPSHQTVSHSSLA 591
T PPKT++ L +F G+ DG + + Q + WS ++ +T S SS++
Sbjct: 922 TMPPKTSSRYALRDDVFSSAMGRLDGTQVITPPQ--PVNGWSNNTFQMKRTNSSSSIS 977
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 418 TFPPKTATVPLLTSGIFQGCCGKPDGPTIRSAQQLSILYDWSLSSTPSHQTVSHSSLA 591
T PPKT++ L +F G+ DG + + Q + WS ++ +T S SS++
Sbjct: 922 TMPPKTSSRYALRDDVFSSAMGRLDGTQVITPPQ--PVNGWSNNTFQMKRTNSSSSIS 977
>AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform a protein.
Length = 552
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 255 KHWFQHLEGLRLH*IVKFESTRRLPTQLLHF 163
+ WFQHL + ST LP Q+L F
Sbjct: 46 ERWFQHLSSFEMTAETDVRSTENLPQQILDF 76
>Z46676-1|CAA86661.1| 799|Caenorhabditis elegans Hypothetical
protein C08B11.1 protein.
Length = 799
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 558 VTPDCFTFVACVAALRNLQSYFLINLH 638
++ C T ++C+++LRNL+ + NL+
Sbjct: 190 ISSTCVTDISCISSLRNLEVLIMYNLN 216
>X16473-1|CAA34493.1| 799|Caenorhabditis elegans zyg-11 protein
protein.
Length = 799
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 558 VTPDCFTFVACVAALRNLQSYFLINLH 638
++ C T ++C+++LRNL+ + NL+
Sbjct: 190 ISSTCVTDISCISSLRNLEVLIMYNLN 216
>AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine
receptor, class j protein44 protein.
Length = 350
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 522 FDPIRLVIIQHTVTPDCFTFVACV 593
F+ +R +I+Q TVTP CF+F C+
Sbjct: 244 FELLRALIVQ-TVTPICFSFSPCL 266
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = +3
Query: 87 TKMPRRGVHTESGPSTTADVIMLNDRNVATVSGDVASIQTSQFNATEGPRDVETNASNAQ 266
T P + TES STT+ + + ++ +G V+S ++ ++++ ++ ++S ++
Sbjct: 389 TTTPMISLTTESMQSTTSSSEISTTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSE 448
Query: 267 KSEKDKDIP 293
+E P
Sbjct: 449 STESQSSTP 457
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = +3
Query: 87 TKMPRRGVHTESGPSTTADVIMLNDRNVATVSGDVASIQTSQFNATEGPRDVETNASNAQ 266
T P + TES STT+ + + ++ +G V+S ++ ++++ ++ ++S ++
Sbjct: 389 TTTPMISLTTESMQSTTSSSEISTTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSE 448
Query: 267 KSEKDKDIP 293
+E P
Sbjct: 449 STESQSSTP 457
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = +3
Query: 87 TKMPRRGVHTESGPSTTADVIMLNDRNVATVSGDVASIQTSQFNATEGPRDVETNASNAQ 266
T P + TES STT+ + + ++ +G V+S ++ ++++ ++ ++S ++
Sbjct: 389 TTTPMISLTTESMQSTTSSSEISTTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSE 448
Query: 267 KSEKDKDIP 293
+E P
Sbjct: 449 STESQSSTP 457
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = +3
Query: 87 TKMPRRGVHTESGPSTTADVIMLNDRNVATVSGDVASIQTSQFNATEGPRDVETNASNAQ 266
T P + TES STT+ + + ++ +G V+S ++ ++++ ++ ++S ++
Sbjct: 389 TTTPMISLTTESMQSTTSSSEISTTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSE 448
Query: 267 KSEKDKDIP 293
+E P
Sbjct: 449 STESQSSTP 457
>Z83236-6|CAB05783.1| 132|Caenorhabditis elegans Hypothetical
protein K10H10.7 protein.
Length = 132
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 566 WCDGVLDNDQSYRIESCCALRIVGP 492
W +GV+DN+ R++S C V P
Sbjct: 40 WAEGVVDNEHMGRLKSNCCCIYVAP 64
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 27.5 bits (58), Expect = 9.0
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 111 HTESGPSTTADVIMLNDRNVA-TVSGDVASIQTSQFNATEGPRDVETNASNAQKSEKDKD 287
+TE+ +T + + A T + A+ TS+ ++T D E N + K EK+K
Sbjct: 158 NTETAANTNVENGTASTNGTASTATPTAATSSTSRSSST----DEEDNDA-VSKEEKEKR 212
Query: 288 IPFSRYLRKVVKTSSRVIRALSIAAFVIL 374
+P +L ++VK S + S AA+V+L
Sbjct: 213 LPLLTHLWQIVKLCSVQWKWFS-AAYVLL 240
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2
Query: 637 CKFIKK*LWRLRN 599
CKF+K+ LWR+RN
Sbjct: 748 CKFVKRNLWRVRN 760
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,631,276
Number of Sequences: 27780
Number of extensions: 336633
Number of successful extensions: 1127
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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