Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o19r
(725 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 64 1e-10
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 53 2e-07
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 52 5e-07
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 50 2e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 45 5e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 44 1e-04
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 41 9e-04
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 38 0.011
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.014
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.033
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.058
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 34 0.10
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.10
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 33 0.31
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 33 0.31
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.3
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 30 1.7
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 30 1.7
SB_29023| Best HMM Match : Pentaxin (HMM E-Value=2.9e-11) 29 5.1
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 8.9
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 64.1 bits (149), Expect = 1e-10
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Frame = -3
Query: 483 VHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTT 304
V + HPE+ + D++++ ++ + F + GWG+T
Sbjct: 154 VSHVIEHPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLTNQQPTPGKRCYITGWGST 213
Query: 303 VQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAP 124
+ G+ S L + L + + +C+ +Y G V + CAG R+G N D G P
Sbjct: 214 IGTGN-SPRILQQAMLPIASHNDCKNKYYG---VSSTAHLCAGEARSGASGGCNGDSGGP 269
Query: 123 AFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWILQ 10
++ L G VS+GK + Y V ++S+T+WI Q
Sbjct: 270 LVCEDNGRWYLHGAVSYGKLHCPTTYYTVFARVASYTDWIKQ 311
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 53.2 bits (122), Expect = 2e-07
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 13/209 (6%)
Frame = -3
Query: 657 EVFLPILNQWFQQCAGIVLTNYHYLSTATCF--HGEFYDPAYRRIIAGSSRRSE------ 502
E+ L N C G ++ Y L+++ CF + R+ RR E
Sbjct: 2 EIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEII 61
Query: 501 PGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDL 322
G+ Y+H + + D DV+++++ F +
Sbjct: 62 QGDQLYIHPGLVVGDLISPG-DYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFV 120
Query: 321 LGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDN 142
GWG T +G S L++LE+ + +KE C ++ + D FCAG + GGRD
Sbjct: 121 TGWGKTAEGSPYSP-VLNELEVDIVSKEVCNAN-DSYNGTINDRYFCAGFPQ-GGRDSCG 177
Query: 141 TDLGAPAFFQNA-----LVGIVSFGKSNA 70
D G P NA L G+VS+G+ A
Sbjct: 178 GDSGGPLVCSNADGQYVLRGVVSWGEGCA 206
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 52.8 bits (121), Expect = 3e-07
Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 12/216 (5%)
Frame = -3
Query: 627 FQQCAGIVLTNYHYLSTATCFH-----GEFYDPAYRRIIAGSSRRSEPGEISY---VHFA 472
F C G ++++ ++ A H G +P ++ G+ ++ + +
Sbjct: 452 FHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVGAHKKRGSTSVQQSLRLSQI 511
Query: 471 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGG 292
+ HP++++ D++++ + + F + GWG
Sbjct: 512 IEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAINGDT 571
Query: 291 SVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 112
S L + L + + ENCR +Y V + CAG R+ N D G P +
Sbjct: 572 QQSPDILQQAMLPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCE 628
Query: 111 NA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 16
+ L G VS+G N + V ++S+T+WI
Sbjct: 629 DNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 664
Score = 31.1 bits (67), Expect = 0.95
Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 11/215 (5%)
Frame = -3
Query: 627 FQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA--VNHPEF 454
F C G ++++ ++ A C H Y ++ +R + + + HP++
Sbjct: 129 FHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY 188
Query: 453 SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLG-----WGTTVQGGS 289
++ D++++ + + F + G T +
Sbjct: 189 NDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGAIIRELHTFRRENR 248
Query: 288 VSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN 109
+ + NL + ++ EN R +++ +D AGG N D G P ++
Sbjct: 249 MGENNLRARDF--SSFENKRRKFREKREARSD--------AAGG---CNGDSGGPLVCED 295
Query: 108 ----ALVGIVSFGKSNANDIYPVVLTSISSFTEWI 16
L G VS+G N + V ++S+T+WI
Sbjct: 296 NGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 330
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 52.0 bits (119), Expect = 5e-07
Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 15/169 (8%)
Frame = -3
Query: 465 HPEFSEENYDKDVSIVRVTHAIHFGPNXX---XXXXXXXXXXXXXXXXVDLLGWGTTVQG 295
HP +S ++YD D++++R+ + F + GWG
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKLW 258
Query: 294 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFF 115
LH+ + + + + CR+ + D +VT N FCAG + D D G P
Sbjct: 259 RDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAGFENSSRGDACQGDSGGPFSV 316
Query: 114 QN------------ALVGIVSFGKSNANDIYPVVLTSISSFTEWILQNV 4
N L+G++S+G V T + +F +WIL +
Sbjct: 317 DNPLPATPKGQHRHVLLGVISWGDGCGKFGKYGVYTRLFNFIDWILNEI 365
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = -3
Query: 318 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 139
GWG +G + L + ++ + +++ C Q DR +T+N CAG+ R GG D
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM-RQGGVDSCQG 408
Query: 138 DLGAPAFFQN-------ALVGIVSFGKSNANDIYPVVLTSISSFTEWI 16
D G P N LVG+ S+GK A + + ++ + WI
Sbjct: 409 DSGGPFVCTNPENPRQWTLVGVTSWGKGCARALKYGIYANVRRYLHWI 456
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 48.8 bits (111), Expect = 4e-06
Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 9/223 (4%)
Frame = -3
Query: 642 ILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAV-- 469
I N Q C G ++T ++ A C + +PA ++ G+ R+ P + ++
Sbjct: 649 IYNSGRQFCGGTLVTPEWVITAAHCVVDK--NPASIQVRLGAQDRTSPDPSVEMRISIRS 706
Query: 468 --NHPEF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQ 298
NHP++ S + D++++R++ + GWGT
Sbjct: 707 IHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSS 766
Query: 297 GGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAF 118
GGS + L++ + + + C Y G ++ + CAG GG D D G P
Sbjct: 767 GGSQPEA-LNQAVVPLRTRSECERSYPGK---ISADMICAGNPE-GGVDTCQGDSGGPLV 821
Query: 117 FQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWILQNVT 1
Q+ L G+ S+G A V + +W+ +T
Sbjct: 822 CQHGNQWFLTGVTSWGHGCAFAGKYGVYAGVQQLKQWVFHVMT 864
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 45.2 bits (102), Expect = 5e-05
Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 4/180 (2%)
Frame = -3
Query: 543 AYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXX 364
A+RR+ SS +E ++ V H FS Y D++++++
Sbjct: 2 AHRRL---SSNTAE--QVIKVKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLP 56
Query: 363 XXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKF 184
L GWG V L + + + + E+C+ +Y + +
Sbjct: 57 SPGDVPPVGSKCWLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKYGSG--IYSYTHL 114
Query: 183 CAGLVRAGGRDYDNTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSISSFTEWI 16
CAG + D G P + L G+VSFG N V T +S++ +WI
Sbjct: 115 CAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWI 174
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 44.4 bits (100), Expect = 1e-04
Identities = 49/205 (23%), Positives = 78/205 (38%), Gaps = 4/205 (1%)
Frame = -3
Query: 618 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 439
C G ++T L+ A C +F P+ RI S+ + E + H +FS +
Sbjct: 106 CGGSLITPEWVLTAAHCVE-DFPHPSAHRIKERSAIQQE----FRLTKLFKHKDFSMSHL 160
Query: 438 DKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHKLE 259
DV+++++ + I + GWG V GG S+ L +
Sbjct: 161 KNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRLVGGGQPSE-ILQQAM 219
Query: 258 LIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIV 91
L V + C + V + CAG + GG D+ G P L G V
Sbjct: 220 LPVASHSACDRKNSYLVPVEEKSMICAGGMGMGGCQGDS---GGPFVCNEGGRWVLRGAV 276
Query: 90 SFGKSNANDIYPVVLTSISSFTEWI 16
S+G+ + V +SSF +WI
Sbjct: 277 SWGQPMCGTDHYTVFARVSSFIDWI 301
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 41.1 bits (92), Expect = 9e-04
Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 7/208 (3%)
Frame = -3
Query: 618 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG---EISYVHFAVNHPEFSE 448
C G V++ + L+ A C E + ++ G R ++ V ++H +S
Sbjct: 574 CGGNVISPWWVLTAAHCVQDE--RASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSY 631
Query: 447 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLH 268
D D +++++T ++F + GWG+T GS S L
Sbjct: 632 NTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQ 689
Query: 267 KLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LV 100
++ L + N C Y R +T CAG + + D G P + L+
Sbjct: 690 EVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCERGGRWFLM 748
Query: 99 GIVSFGKSNANDIYPVVLTSISSFTEWI 16
G+ S+G P V + + + +WI
Sbjct: 749 GLSSWGWV-CPQARPKVFSDVLAAMDWI 775
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 41.1 bits (92), Expect = 9e-04
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Frame = -3
Query: 471 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLL-GWGTTVQG 295
V +P F+E +Y D++++ + + P+ + GWG +G
Sbjct: 21 VYNPGFNERHYRNDIALLELERPVLTNPHVSPVCLPPVNAGKVPVGKNCFITGWGRVFEG 80
Query: 294 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVTD-NKFCAGLVRAGGRDYDNTDLGAPAF 118
++ L + EL+V + C ++ G V D + CAG GG D+ G P
Sbjct: 81 SDEAEF-LQEAELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQGDS---GGPLV 135
Query: 117 FQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 16
A L GIVS+G + + V T + ++ WI
Sbjct: 136 CNEAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWI 173
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 40.3 bits (90), Expect = 0.002
Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 7/212 (3%)
Frame = -3
Query: 618 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG--EISYVHFAVNHPEFS-E 448
C G V+ ++ A CF Y + + G + V + HP+++
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPH 194
Query: 447 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLH 268
N+D DV+++++ + + + GWG + G LH
Sbjct: 195 NNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWGHLQEAGH-GPWVLH 253
Query: 267 KLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LV 100
+ + + +++ C++ Y V+ CAG AGG D D G P + L+
Sbjct: 254 QAAVPLVSRDTCQKAYNDLHYKVSSRMRCAG-YGAGGIDACQGDSGGPLVCKEGDVWYLM 312
Query: 99 GIVSFGKSNANDIYPVVLTSISSFTEWILQNV 4
G +S+G A V + W+ +
Sbjct: 313 GAISWGVGCARGGRYGVYADMMDLKYWVQSTI 344
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -3
Query: 285 SDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 106
+ G L + L + CR+QY+ DR CAG R G N D G P + +
Sbjct: 632 TQGTLQQAMLPIAEHSLCRKQYRV-DRTAHP---CAGEARVGAAGGCNGDSGGPLVCEQS 687
Query: 105 ----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 16
L G VS+G Y V T +SS+ WI
Sbjct: 688 GVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -3
Query: 258 LIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIV 91
L + + ENCR +Y V + CAG R+ N D G P ++ L G V
Sbjct: 913 LPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAV 969
Query: 90 SFGKSNANDIYPVVLTSISSFTEWI 16
S+G + V ++S+T+WI
Sbjct: 970 SYGMKYCPTTHYTVFARVASYTDWI 994
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 4/156 (2%)
Frame = -3
Query: 471 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGG 292
++H +S D D +++++T ++F + GWG+T G
Sbjct: 375 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 432
Query: 291 SVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 112
S S L ++ L + N C Y R +T CAG + + D G P +
Sbjct: 433 SPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCE 491
Query: 111 NA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 16
L+G+ S+G P V + + + +WI
Sbjct: 492 RGGRWFLMGLSSWGWV-CPQARPKVFSDVLAAMDWI 526
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Frame = -3
Query: 468 NHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVD--LLGWGTTVQG 295
+HP FS YD D++++R+ + +LGWG T
Sbjct: 1249 SHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVTEN- 1307
Query: 294 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFF 115
L + + V N C++ Y+ VT N CAG + RD N D G F
Sbjct: 1308 -KRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAG-YKNKSRDSCNRDSGGGFVF 1365
Query: 114 QNA 106
++
Sbjct: 1366 YDS 1368
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 37.5 bits (83), Expect = 0.011
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = -3
Query: 324 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTD-NKFCAGLVRAGGRDY 148
+ GWG +G ++ L + EL+V + C ++ G V D + CAG GG
Sbjct: 531 IAGWGRVFEGSDEAEF-LQEAELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQG 588
Query: 147 DNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 16
D+ G P A L GIVS+G + + V T + ++ WI
Sbjct: 589 DS---GGPLVCNEAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWI 633
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 37.1 bits (82), Expect = 0.014
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Frame = -3
Query: 324 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 145
+ GWG GG+ S L + + + + C + V+ CA + G D
Sbjct: 344 ITGWGRLHSGGA-SPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCA---QVPGIDTC 399
Query: 144 NTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSISSFTEWILQNV 4
D G P +N LVG+ S+G A+ YP + ++ +W+ ++
Sbjct: 400 QGDSGGPLVCENNNKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWVFHHM 450
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 35.9 bits (79), Expect = 0.033
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 14/117 (11%)
Frame = -3
Query: 324 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRV--------VTDNKFCAGLV 169
+ GWG + G ++ L + +L V + C E++ G + VT+ CAG
Sbjct: 158 ITGWGRSYYPGPTAN-KLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDA 216
Query: 168 RAGGRDYDNTDLGAPAFFQN-----ALVGIVSFGKSNANDI-YPVVLTSISSFTEWI 16
G++ N D G P +N L G+VS+G + + V +S WI
Sbjct: 217 GKTGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWI 273
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 35.1 bits (77), Expect = 0.058
Identities = 28/154 (18%), Positives = 60/154 (38%), Gaps = 5/154 (3%)
Frame = -3
Query: 618 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA---VNHPEFSE 448
C G +++ ++ A C G + P+Y +++ G R+ P H + HP ++
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSY-KVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151
Query: 447 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLH 268
D++++ ++ + + GWG G S L
Sbjct: 152 PQLSNDIALIELSSPVPLSDRGHQVSVGSKCF---------ITGWGKIRHPGG-SHHILQ 201
Query: 267 KLELIVTNKENCRE--QYKGHDRVVTDNKFCAGL 172
+ + +++ C++ Q G +TD+ CAG+
Sbjct: 202 QAMMPPLSQDACKKKVQQAGFGIQITDSMVCAGV 235
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 34.3 bits (75), Expect = 0.10
Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 2/161 (1%)
Frame = -3
Query: 618 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSE-PGEISY-VHFAVNHPEFSEE 445
C G ++ ++ A C Y ++ R P + ++ + H +FS
Sbjct: 57 CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116
Query: 444 NYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXVDLLGWGTTVQGGSVSDGNLHK 265
+ D++++++ + + GWG TV GGS + G L +
Sbjct: 117 HLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSAA-GILQQ 175
Query: 264 LELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDN 142
L V +C+ V + + CAG GG D+
Sbjct: 176 AMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGDS 216
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -3
Query: 324 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 145
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 78 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 132
Query: 144 NTDLGAP 124
D G P
Sbjct: 133 QGDSGGP 139
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 34.3 bits (75), Expect = 0.10
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -3
Query: 324 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 145
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 476
Query: 144 NTDLGAP 124
D G P
Sbjct: 477 QGDSGGP 483
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 463 MVNSK-VNIRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGENNTSALLE 627
M+NS+ +N FTG TGR AT +V+ +E GS ++V+ + + +E
Sbjct: 215 MINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADLDNAVE 270
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 32.7 bits (71), Expect = 0.31
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -3
Query: 657 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEIS 487
E F+ + W QC+G ++ H ++ A C H G+++ I+ G S S E+
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197
Query: 486 YVHFAV 469
Y FAV
Sbjct: 198 Y--FAV 201
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 32.3 bits (70), Expect = 0.41
Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 12/178 (6%)
Frame = -3
Query: 513 RRSEPGEISY-VHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXX 337
RR + E + V + HP + + D DV+++R++H
Sbjct: 1394 RRGDGTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVG 1453
Query: 336 XXVDLLGWGTT---VQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVR 166
+ GWG T G SV L + + + +++ C + VVT C G
Sbjct: 1454 KNCYITGWGRTGYNRPGASV----LQEAMMPIVSQQTCAAAMRRWG-VVTSRMICGGFGA 1508
Query: 165 AGGRDYDNTDLGAPAFFQNA-----LVGIVSFGK---SNANDIYPVVLTSISSFTEWI 16
D G P Q + + G+VS+G S+ + Y V ++ F WI
Sbjct: 1509 GSTISGCFGDSGGPFVCQGSNKRWNIQGVVSWGTRTCSSGQNEY-TVYARVAQFVPWI 1565
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 31.1 bits (67), Expect = 0.95
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = -3
Query: 657 EVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSS---RRSEPGEIS 487
+V L + Q+C G ++ L+ A CF F P + G S RR G+
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSL 1311
Query: 486 YVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 394
+ HP+++ +++ D++++++ F
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEF 1342
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 120 RQGHPSQYCRSRGHQPGPNRR--RICYQSRRD 209
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 99 LLAHFGRRQGHPSQYCRSRGHQPGPNRRRICYQSRRDHDPCTV 227
L+ H G R +PS+ C + P +++ YQS+ HD C +
Sbjct: 162 LICH-GCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFI 203
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -3
Query: 324 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGG 157
++GWG TV GG ++ L + L V +C ++ RV + CAG RA G
Sbjct: 92 VVGWGRTVGGGQGAE-ILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAAG 146
>SB_29023| Best HMM Match : Pentaxin (HMM E-Value=2.9e-11)
Length = 204
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = -3
Query: 288 VSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDY----DNTDLGAPA 121
++D H + +N E + Y + V + G +GG + + DLG
Sbjct: 78 IADSRFHSVVATWSNSEGEFQFYVDNSLVTKEKNLATGRTISGGGVFIIGNEQDDLGGGF 137
Query: 120 FFQNALVGIVS 88
F NALVG ++
Sbjct: 138 SFGNALVGTIT 148
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 54 RGRCHWHCSFQKIRCLLAHFGRRQGHPSQYCRSRGHQPGPNRRRICY 194
R CH F+++ LLA F R+ HP + R H P R++C+
Sbjct: 249 RQMCHPLAPFRQMCYLLAPFRRQMCHPLAHFRQMCHPLAP-FRQMCH 294
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 672 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 550
+LV +E + P N+W ++ +LT Y STA G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 VEVAVRYTAALNGSSPSEQI-NKNTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILVVI 444
+++ V Y AA+ S Q N+N L Y + D + A + M SY+ + +
Sbjct: 303 MKIKVNYVAAVQDESTYSQFYNENNLKYEEEFTDVLENIKTRARIVIMVTSYNMAVEGMH 362
Query: 445 LLREFGMVNSK 477
L + G++N +
Sbjct: 363 LAKNRGLINGE 373
>SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +1
Query: 211 MTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKNTLGYYDTLLDNSTLLDVW 390
M +VLF A+F + EF ++ + + T + +GS + +N Y D +D T+L
Sbjct: 1 MAVVLF-ALFRL--LEFLMLVIFTKGTCSNSGSQQALHVNITCEKYLDVYVDGETMLTGV 57
Query: 391 AEVDGMCYSYDAHILVV 441
V + +H++ V
Sbjct: 58 QGVHSILIDSSSHVMAV 74
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 602 SPTTTTFQLLPVSMENSTILHTVALSLDLPVAVSPVKYLMFTLLLTIPNSL 450
SP+T+ Q++P + + L T + S +LPV + FT IP +
Sbjct: 143 SPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQSFRMTFTPPSMIPKPI 193
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,832,240
Number of Sequences: 59808
Number of extensions: 625460
Number of successful extensions: 1485
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -