Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o16r
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    34   0.15 
L11451-1|AAA28918.1|  786|Drosophila melanogaster serine protein...    32   0.78 
AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p pro...    32   0.78 
AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA...    32   0.78 
L08825-1|AAA28914.1|  723|Drosophila melanogaster single-strande...    29   5.5  
BT022375-1|AAY54791.1|  246|Drosophila melanogaster IP08087p pro...    28   9.6  
AE014297-565|AAN13344.2|  246|Drosophila melanogaster CG31493-PA...    28   9.6  
AE013599-2072|AAM70976.1|  733|Drosophila melanogaster CG30471-P...    28   9.6  

>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
            protein.
          Length = 1286

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
 Frame = +2

Query: 119  TAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRT 298
            T+GPT+   R   +    +P     P S T   ++R T     +TT +  S P      T
Sbjct: 984  TSGPTTTTPRSTTKTSTCAP-TTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTT----T 1038

Query: 299  RLKMRISPS-AEPTDAETLGTARTKLSRVPT*LTRRKCRELKSSALTSVT 445
              +   +PS + PT      T  T  SR PT  T R   +  + A T+ T
Sbjct: 1039 TPRSTTTPSTSRPTTTTPRSTTTTSTSR-PTTTTPRSTTKTSTCAPTTTT 1087



 Score = 29.9 bits (64), Expect = 3.1
 Identities = 36/148 (24%), Positives = 54/148 (36%)
 Frame = +2

Query: 2   RSSIYSNLLMTSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRPKRLIWRLDLTSPI 181
           RS+  ++    +  T   T  TS +     T   +    T+GPT+   R        SP 
Sbjct: 465 RSTTTTSTSRPTTTTPRSTTTTSTSGPTTTTPRSTTTTTTSGPTTTTPRSTTTTCTCSP- 523

Query: 182 VIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTA 361
               P S T   ++R T     +TT +    P     R+      + ++ PT      T 
Sbjct: 524 TTTTPRSTTTPSTSRPTTTTPRSTTTTCTCSPTTTTPRS---TTTTSTSRPTTTTPRSTT 580

Query: 362 RTKLSRVPT*LTRRKCRELKSSALTSVT 445
            T  SR PT  T R      +S  T+ T
Sbjct: 581 TTTTSR-PTTTTPRSTTTTSTSGPTTTT 607



 Score = 28.7 bits (61), Expect = 7.2
 Identities = 30/109 (27%), Positives = 41/109 (37%)
 Frame = +2

Query: 119  TAGPTSRPKRLIWRLDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRT 298
            T+GPT+   R       TS      P S T   ++  T     +TT +  S P     R+
Sbjct: 936  TSGPTTTTPRST-TTTCTSCPTTTTPRSTTTTCTSCPTTTTPRSTTTTCTSGPTTTTPRS 994

Query: 299  RLKMRISPSAEPTDAETLGTARTKLSRVPT*LTRRKCRELKSSALTSVT 445
              K   + +  PT      T  T  SR PT  T R      +S  T+ T
Sbjct: 995  TTK---TSTCAPTTTTPRSTTTTSTSR-PTTTTPRSTTTTTTSRPTTTT 1039


>L11451-1|AAA28918.1|  786|Drosophila melanogaster serine proteinase
           protein.
          Length = 786

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 23/86 (26%), Positives = 33/86 (38%)
 Frame = +2

Query: 200 SLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSR 379
           S T   ++  T    + TT  R + P     RT       P   PT A +  +  T  S+
Sbjct: 403 SSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSK 462

Query: 380 VPT*LTRRKCRELKSSALTSVTRPEK 457
            PT  T R      SS+   VT  ++
Sbjct: 463 TPT--TTRPISSSSSSSSGIVTSSQR 486


>AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p
           protein.
          Length = 683

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 23/86 (26%), Positives = 33/86 (38%)
 Frame = +2

Query: 200 SLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSR 379
           S T   ++  T    + TT  R + P     RT       P   PT A +  +  T  S+
Sbjct: 300 SSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSK 359

Query: 380 VPT*LTRRKCRELKSSALTSVTRPEK 457
            PT  T R      SS+   VT  ++
Sbjct: 360 TPT--TTRPISSSSSSSSGIVTSSQR 383


>AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA
           protein.
          Length = 787

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 23/86 (26%), Positives = 33/86 (38%)
 Frame = +2

Query: 200 SLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSR 379
           S T   ++  T    + TT  R + P     RT       P   PT A +  +  T  S+
Sbjct: 404 SSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSK 463

Query: 380 VPT*LTRRKCRELKSSALTSVTRPEK 457
            PT  T R      SS+   VT  ++
Sbjct: 464 TPT--TTRPISSSSSSSSGIVTSSQR 487


>L08825-1|AAA28914.1|  723|Drosophila melanogaster single-stranded
           recognition proteinprotein.
          Length = 723

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 118 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 288
           DG S+  S + D    E   D+A  Y S++ +D+D   +  G G  S+   K K   SE+
Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNEESDSDEDSDASGGGGDSDGAKKKKEKKSEK 528

Query: 289 PQ 294
            +
Sbjct: 529 KE 530


>BT022375-1|AAY54791.1|  246|Drosophila melanogaster IP08087p
           protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 492 SQRSRHGGEDQPLSTIHRFH*TSLRSRCQGCAEN 593
           SQ S+  G    + T+H++H + LRS C   AE+
Sbjct: 196 SQSSQIMGRQLGMKTMHKWHFSELRSLCGAMAES 229


>AE014297-565|AAN13344.2|  246|Drosophila melanogaster CG31493-PA
           protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 492 SQRSRHGGEDQPLSTIHRFH*TSLRSRCQGCAEN 593
           SQ S+  G    + T+H++H + LRS C   AE+
Sbjct: 196 SQSSQIMGRQLGMKTMHKWHFSELRSLCGAMAES 229


>AE013599-2072|AAM70976.1|  733|Drosophila melanogaster CG30471-PA
           protein.
          Length = 733

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 22/68 (32%), Positives = 32/68 (47%)
 Frame = +2

Query: 20  NLLMTSWATYSRTRLTSAA*SVR*TGIFSRKLLTAGPTSRPKRLIWRLDLTSPIVIAAPM 199
           +L +   A +S T       S   TG++  +LL A       RL + + L +P+VIA   
Sbjct: 619 SLFVLGRALFSLTICWMIVGSASGTGVWWSRLLEAKFFQHLNRLSYAIYLLNPLVIALVY 678

Query: 200 SLTMMLSA 223
           SLT   SA
Sbjct: 679 SLTSTSSA 686


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,852,186
Number of Sequences: 53049
Number of extensions: 540244
Number of successful extensions: 1862
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)