Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o14r
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.6  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   6.3  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   6.3  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 374 FRLSRESNEHRTYWSHQGFF 315
           +RL  ES E +  W   GFF
Sbjct: 46  YRLEGESREWKALWIRDGFF 65


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 374 FRLSRESNEHRTYWSHQGFF 315
           +RL  ES E +  W   GFF
Sbjct: 46  YRLEGESREWKALWIRDGFF 65


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +2

Query: 254 KMNLIVVEVDDEINIYNELRQRTPDATSRSDVHYFHAIIEIEL 382
           ++++IVV  D+++++   L + T DA   +        +EIEL
Sbjct: 267 QLSMIVVLPDEQVSLGQLLSRLTADAVHETLADMSEEEVEIEL 309


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 488 WQNERLSKRGSFRRSVGALLR 426
           W+ E LSK  +F R V  +L+
Sbjct: 426 WRREFLSKNATFSRPVSVVLK 446


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,510
Number of Sequences: 2352
Number of extensions: 11402
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)