Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10o14r
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g34420.1 68414.m04275 leucine-rich repeat family protein / pr... 30 1.2
At4g18160.1 68417.m02698 outward rectifying potassium channel, p... 30 1.5
At4g01570.1 68417.m00203 pentatricopeptide (PPR) repeat-containi... 29 2.7
At4g34300.1 68417.m04875 glycine-rich protein similar to auxin r... 29 3.5
At1g50610.1 68414.m05685 leucine-rich repeat transmembrane prote... 28 4.7
At5g48660.1 68418.m06022 expressed protein ; expression supporte... 28 6.1
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 28 6.1
At4g14010.1 68417.m02166 rapid alkalinization factor (RALF) fami... 28 6.1
At5g64240.2 68418.m08070 latex-abundant family protein (AMC3) / ... 27 8.1
At5g64240.1 68418.m08069 latex-abundant family protein (AMC3) / ... 27 8.1
At5g45820.1 68418.m05635 CBL-interacting protein kinase 20 (CIPK... 27 8.1
At3g05660.1 68416.m00630 disease resistance family protein conta... 27 8.1
At1g55830.1 68414.m06402 expressed protein similar to M-type 9 p... 27 8.1
>At1g34420.1 68414.m04275 leucine-rich repeat family protein /
protein kinase family protein contains leucine rich
repeat (LRR) domains, Pfam:PF00560; contains protein
kinase domain, Pfam:PF00069
Length = 966
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = -3
Query: 337 TGRIRGSLSQFVINVDLIIDFNNDEIHLQELYLTDVGVIRVSLSGNILYDWLVTPLANVF 158
TG I L++ + N+DL FN+ + L+ + ++ V LS N L W+ +++
Sbjct: 288 TGEIPSGLTKHLENLDL--SFNSLAGSIPGDLLSQLKLVSVDLSSNQLVGWIPQSISSSL 345
Query: 157 VRL 149
VRL
Sbjct: 346 VRL 348
>At4g18160.1 68417.m02698 outward rectifying potassium channel,
putative (KCO6) similar to kco1 [Arabidopsis thaliana]
gi|2230761|emb|CAA69158; member of the 2 pore, 4
transmembrane (2P/4TM) K+ channel family, PMID:11500563
Length = 436
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 293 NIYNELRQRTPDATSRSDVHYFHAIIEIELKIGKFKFGLGTQH 421
++++ +RQ+ P TSRS V A++ + L +G + L H
Sbjct: 132 DLHHPIRQKDPTETSRSVVRQAFALLVVYLSLGVLIYWLNRDH 174
>At4g01570.1 68417.m00203 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 805
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 254 SRALSN*RWCYSSEPFWKHSLRLVGDSFGKCVC 156
S+ L RWCYS P +KHS F + VC
Sbjct: 72 SKKLDFFRWCYSLRPGYKHSATAYSQIF-RTVC 103
>At4g34300.1 68417.m04875 glycine-rich protein similar to auxin
response factor 30 (GI:20145855) {Arabidopsis thaliana}
Length = 313
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 83 SNSGTSNAFNSGFNESHDDIIEKTHKHICQRSHQPIVENVSRKAHSNNTNVS 238
S T N +SG N H I+ THK+ S+ + + HS+ +N S
Sbjct: 126 STGSTHNNHSSGSN--HSSIVGSTHKNHGSGSNHSSIAGPTHNGHSSGSNHS 175
>At1g50610.1 68414.m05685 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor-like protein kinase
GB:AAC12254 GI:3015488 from [Lycopersicon esculentum]
Length = 686
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +2
Query: 32 VQCFEIADYLFQVDIDISNSGTSNAFNSGFNESHDDIIEKTHKHICQRSHQPIVENVSRK 211
+Q F++ D L + ++ SGT A S ++ K +KH+ E++ R
Sbjct: 365 IQRFDLQD-LLRASAEVLGSGTFGASYKAAISSGQTLVVKRYKHMNNVGRDEFHEHMRRL 423
Query: 212 AHSNNTNV 235
N+ N+
Sbjct: 424 GRLNHPNI 431
>At5g48660.1 68418.m06022 expressed protein ; expression supported
by MPSS
Length = 219
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -3
Query: 181 VTPLANVFVRLFDNVIMGFVETTVKSIAGSAIADVNVNLKQVIR 50
+ PL + ++ D + MG TVK+IAG+ + NL +++
Sbjct: 23 IGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSNLMSIVK 66
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 83 SNSGTSNAFNSGFNESHDDIIEKTHKHICQRSHQPIVENVSRKAHSNNTNVS 238
S T N +SG N H I+ THK+ S+ + + HS+ +N S
Sbjct: 156 STGSTHNNHSSGSN--HSSILGSTHKNHSSGSNHSSIVGSTHNNHSSGSNHS 205
>At4g14010.1 68417.m02166 rapid alkalinization factor (RALF) family
protein similar to RALF precursor [Nicotiana tabacum]
GI:16566316
Length = 117
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 488 WQNERLSKRGSFRRSVGALLRKDVACPG 405
W ++RL++ + + S GAL R AC G
Sbjct: 57 WSSQRLTEEQAHKLSYGALRRNQPACDG 84
>At5g64240.2 68418.m08070 latex-abundant family protein (AMC3) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 362
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -3
Query: 535 VRPVLITYRASLGLTNGKMSGLVNVARSGDQLVHYFAKMLR 413
V+P T + S T ++ LV++AR ++++H F ++LR
Sbjct: 17 VQPDARTVQCSTCHTVTQLYSLVDIARGANRIIHGFQQLLR 57
>At5g64240.1 68418.m08069 latex-abundant family protein (AMC3) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 305
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -3
Query: 535 VRPVLITYRASLGLTNGKMSGLVNVARSGDQLVHYFAKMLR 413
V+P T + S T ++ LV++AR ++++H F ++LR
Sbjct: 17 VQPDARTVQCSTCHTVTQLYSLVDIARGANRIIHGFQQLLR 57
>At5g45820.1 68418.m05635 CBL-interacting protein kinase 20 (CIPK20)
identical to CBL-interacting protein kinase 20
[Arabidopsis thaliana] gi|14486384|gb|AAK61493
Length = 439
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 74 IDISNSGTSNAFNS-GFNESHDDIIEKTHKHICQRSHQPIVENVSRKAHSNNTN 232
ID+ +N+F+ F +S D +E +K C R +P ++++ K NN N
Sbjct: 378 IDVEIFEVTNSFHMVEFKKSGGDTME--YKQFCDRELRPSLKDIVWKWQGNNNN 429
>At3g05660.1 68416.m00630 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 883
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -3
Query: 217 VSLSGNILYDWLVTPLANVF----VRLFDNVIMGFVETTVKSIAGSAIADVNVN 68
+ LSGN W+ + L N+F + L+DN G + +++ +++ D++ N
Sbjct: 140 LDLSGNNFSGWIPSSLGNLFHLTSLHLYDNNFGGEIPSSLGNLSYLTFLDLSTN 193
>At1g55830.1 68414.m06402 expressed protein similar to M-type 9
protein (GI:507127) [Streptococcus pyogenes]
Length = 509
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 281 DDEINIYNELRQRTPDATSRSDVHYFHAIIEI 376
D+ N+YNEL +R P A R Y H I EI
Sbjct: 361 DERCNLYNEL-ERQPKAAPRKS--YIHGIKEI 389
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,952,749
Number of Sequences: 28952
Number of extensions: 257703
Number of successful extensions: 661
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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