Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o14f
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.5  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 421 QLVHYFAKMLRAQAKFKFTD 480
           +L HYF  ++R   +F+ T+
Sbjct: 381 ELAHYFESLVRGDERFEITE 400


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 211 LGLTADINAYVDSMIDTLVPFMIKHDLDPLSI 306
           LGLT D+N+    M + +V ++I  DL  +++
Sbjct: 64  LGLTEDLNSAPIRMKNPIVKYIILIDLGEVAV 95


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 451 RAQAKFKFTDLEFDFDY 501
           + QAKF+ TDLE    Y
Sbjct: 38  QGQAKFEITDLEPALQY 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,772
Number of Sequences: 336
Number of extensions: 2896
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)