Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o14f
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261...    30   1.8  
07_03_0759 - 21299502-21299807,21299889-21300039,21300151-213003...    29   2.3  
03_06_0318 + 33103467-33104232,33104332-33105548                       29   4.1  
04_04_1589 - 34636563-34636856,34636982-34637159,34637349-346374...    27   9.4  

>07_03_0762 +
           21324550-21325414,21325606-21325746,21325993-21326177,
           21326200-21326410,21326526-21326769,21326853-21327003,
           21327089-21327439
          Length = 715

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +1

Query: 379 GKMSGLVNVARSGDQLVHYFAKMLRAQAKFKFTDLEFDFDYRVKVMNIGPTGRIRGSLSQ 558
           GK   ++N    G Q +H  +++       K +++  DFDY  K+ + G      G  S+
Sbjct: 480 GKRFKIINGIARGLQYLHEDSQLKIVHRDLKASNILLDFDYSPKISDFGLAKIFGGDQSE 539

Query: 559 FVIN 570
            V N
Sbjct: 540 DVTN 543


>07_03_0759 -
           21299502-21299807,21299889-21300039,21300151-21300388,
           21300729-21300939,21301018-21301133,21301388-21301519,
           21302179-21303073
          Length = 682

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = +1

Query: 340 VLITYRASLGLTNGKMSGLVNVARSGDQLVHYFAKMLRAQAKFKFTDLEFDFDYRVKVMN 519
           +L     ++ L  GK   ++N    G Q +H  +++       K +++  DFDY  K+ +
Sbjct: 449 ILFDIDKNIELDWGKRFKIINGIAQGLQYLHEDSRLKIVHRDLKASNILLDFDYNPKISD 508

Query: 520 IG 525
            G
Sbjct: 509 FG 510


>03_06_0318 + 33103467-33104232,33104332-33105548
          Length = 660

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
 Frame = +1

Query: 175 QARNAVTRNWEGLGLTADINAYVDSMIDTLVPFMIKHD-----LDPLSIPDIEETFEVRP 339
           +   +++R    L L  D  AY+   +  L   + +       +DP  I D E+TF+V  
Sbjct: 477 ECETSMSRTARSLSLFEDEKAYISKHLKKLRQNLHQFSNNGKFIDPKKIDDKEDTFDVTN 536

Query: 340 VLITYR---ASLGLTNGKMSGLVNVARSG 417
               Y+       +TN + S + NV R+G
Sbjct: 537 SEDVYQDADEDSEMTNSENSEMTNVIRNG 565


>04_04_1589 -
           34636563-34636856,34636982-34637159,34637349-34637461,
           34637713-34638316,34638401-34638581,34638674-34638816,
           34638972-34639141,34639221-34639307,34639414-34639639,
           34639825-34639964
          Length = 711

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +1

Query: 115 LALLVATEGHDFVAQSQFHS 174
           +AL V T+ HD+++ S+FHS
Sbjct: 82  IALRVETKRHDYLSDSEFHS 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,003,595
Number of Sequences: 37544
Number of extensions: 330496
Number of successful extensions: 791
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)