Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o13r
         (639 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015538F4 Cluster: PREDICTED: similar to PRAMEl7; n...    34   3.3  
UniRef50_Q0DG53 Cluster: Os05g0552500 protein; n=4; Oryza sativa...    33   5.8  
UniRef50_Q1JSS8 Cluster: ABC transporter, putative precursor; n=...    33   5.8  
UniRef50_UPI0000D8A05A Cluster: aaa family atpase; n=1; Eimeria ...    33   7.7  
UniRef50_Q1LCY5 Cluster: Uncharacterized protein UPF0065 precurs...    33   7.7  

>UniRef50_UPI00015538F4 Cluster: PREDICTED: similar to PRAMEl7; n=2;
           Mus musculus|Rep: PREDICTED: similar to PRAMEl7 - Mus
           musculus
          Length = 428

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 25/89 (28%), Positives = 46/89 (51%)
 Frame = -2

Query: 626 PKTEPAMIPYLGQALNEVVTAVLTGQSQVATPVIIPAMEVSLWTLTEISAALESPVTNPV 447
           P T+ A +P    AL  V  + L   +Q A   ++P ++ +L  +T+ SA +  PVT   
Sbjct: 326 PVTQSASVPVTQSALVPVTQSALVPVTQSA---LVPVIQSALVPVTQ-SALV--PVTQSA 379

Query: 446 LVPYLENALNVIMDAMFAGHEVTSICVSI 360
           LVP++++AL   + +      V ++ + I
Sbjct: 380 LVPFIQSALVPFIQSALVPVPVLTVMIII 408


>UniRef50_Q0DG53 Cluster: Os05g0552500 protein; n=4; Oryza
           sativa|Rep: Os05g0552500 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 327

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = +3

Query: 522 DNHWSGNLALSSQDGGDDLVERLAKVRNH 608
           D+HWS NL+LSSQ+ G  L+E +A+  NH
Sbjct: 74  DDHWSSNLSLSSQE-GSKLLESVAE-ENH 100


>UniRef50_Q1JSS8 Cluster: ABC transporter, putative precursor; n=1;
            Toxoplasma gondii|Rep: ABC transporter, putative
            precursor - Toxoplasma gondii
          Length = 3040

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
 Frame = -1

Query: 597  PWPGAQRGRHRRPDWT-KPGCHSSDYPCYGSLPLDPDRDLXXXXXXXXXXXSGSLPGECP 421
            P P +    H  P W  KP CHSS     GS P + +R+               L G+  
Sbjct: 2849 PSPPSSSDAHEAPRWLPKPSCHSSPSAPSGSAPCEGERE-GREAAEGPTARGTRLSGKRR 2907

Query: 420  QRDHGRHVRRTRS 382
              D  RH  R  S
Sbjct: 2908 DADDERHPGRVHS 2920


>UniRef50_UPI0000D8A05A Cluster: aaa family atpase; n=1; Eimeria
           tenella|Rep: aaa family atpase - Eimeria tenella
          Length = 1294

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -2

Query: 566 AVLTGQSQVATPVIIPAM--EVSLWTLTEISAALESPVTNPVLVPYLENAL 420
           A    +   A   I P+   EVSL TL  I AAL   +T  +L+P+L N L
Sbjct: 154 AAAAPEPAAAAAAIAPSKLPEVSLETLVGIPAALRDKITKHILLPFLTNHL 204


>UniRef50_Q1LCY5 Cluster: Uncharacterized protein UPF0065 precursor;
           n=3; Cupriavidus|Rep: Uncharacterized protein UPF0065
           precursor - Ralstonia metallidurans (strain CH34 / ATCC
           43123 / DSM 2839)
          Length = 332

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -2

Query: 635 LQDPKTEPAMIPYLGQALNEVVTAVLTGQSQVATPVIIPA 516
           L   +T+   IPY G +  E+VTA+++GQ+Q   PV+  A
Sbjct: 178 LHQTRTKAVHIPYKGAS--EIVTAMMSGQTQFGMPVLSTA 215


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,885,067
Number of Sequences: 1657284
Number of extensions: 9237150
Number of successful extensions: 33958
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33759
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)