Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o09r
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.60 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   1.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   9.7  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.7  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 27.1 bits (57), Expect = 0.60
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 299 SCSCADLYYSTHNLSLRNAEWEAKTLCNMHWN 204
           S +C D Y    +LS+ N E E++ LC   ++
Sbjct: 175 SATCRDTYGLPDSLSVMNGEDESRALCTSEYS 206


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 714 VSASAG-VYVDMFTRFQAGFLSAIV 643
           VSA  G VYV MFTRF     SA++
Sbjct: 546 VSAFEGSVYVRMFTRFTQEIFSALI 570


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 327  LYQAHLYLGLMLMCGFVLFDTQLII 253
            LY   LY+G+  + G   FD  LI+
Sbjct: 938  LYGVFLYMGVSALKGLQFFDRLLIM 962


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 412 PAASFSKHSSSREAYKYQGNAE 477
           P A F++HSSSR A K+ G  E
Sbjct: 415 PRALFARHSSSRLA-KFIGEQE 435


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 769,611
Number of Sequences: 2352
Number of extensions: 16613
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)