Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10o09r
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.73 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.73 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   6.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.0  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 386 VINVPPRNSQLPRSA--SIAAAEKHTNTRVMPSRAVIMIDGSTTLTYSSR 529
           V+N+   ++ + R++  S+        + V+ +R V+  DGS T  YSS+
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 386 VINVPPRNSQLPRSA--SIAAAEKHTNTRVMPSRAVIMIDGSTTLTYSSR 529
           V+N+   ++ + R++  S+        + V+ +R V+  DGS T  YSS+
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 16  LKYFNQKIKKKTNIF 60
           L++F  KIK+K N+F
Sbjct: 264 LEHFEMKIKRKHNVF 278


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = +2

Query: 428 ASIAAAEKHTNTRVMPSRAVIMIDGSTTLTYSSRGPMLMPDVNPNP 565
           A++  A   T        A I++    T  Y++  P L   +NPNP
Sbjct: 180 ATVVQAHLDTCDFTRDKVAPILVRARETPNYTACPPTLACPLNPNP 225


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 428 ASIAAAEKHTNTRVMPSRAVIMIDGSTTLTYSSRGPML 541
           +S+AAA+      VMP   ++ + G T       GPML
Sbjct: 77  SSLAAADLLVGLAVMPPAVLLQLTGGTW----ELGPML 110


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +2

Query: 455 TNTRVMPSRAVIMIDGSTTLTY 520
           TNT + P+  +++ + +TT+ +
Sbjct: 326 TNTELNPNTFILVAENNTTMVF 347


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 527 RGPMLMPDVNPN 562
           RGPM   D NPN
Sbjct: 856 RGPMTNDDFNPN 867


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,720
Number of Sequences: 438
Number of extensions: 4266
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)